RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 MGAT5Q09328 741 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 CSHL1Q14406 222 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 GBX1Q14549 363 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 RBBP5Q15291 538 aaKnown RBP7.79□□□□□ -1.16
DNMT1-219ENST00000589349 TERF2Q15554 542 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 INPP5JQ15735 1006 aaPredicted RBP7.79□□□□□ -1.16
DNMT1-219ENST00000589349 SYT16Q17RD7 645 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 TEDDM1Q5T9Z0 273 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 FAM45BPQ6NSW5 357 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 HIBCHQ6NVY1 386 aaPredicted RBP7.79□□□□□ -1.16
DNMT1-219ENST00000589349 SYT10Q6XYQ8 523 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 CYHR1Q6ZMK1 362 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 RNF44Q7L0R7 432 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 MAATS1Q7Z4T9 603 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 PAQR7Q86WK9 346 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 CTAGE3PQ8IX95 158 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 BCL6BQ8N143 479 aaPredicted RBP7.79□□□□□ -1.16
DNMT1-219ENST00000589349 DNAJB14Q8TBM8 379 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 FAM45AQ8TCE6 357 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 CCT6BQ92526 530 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 CDKL2Q92772 493 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 PYCR2Q96C36 320 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 VPS39Q96JC1 886 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 TSNARE1Q96NA8 513 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 HAUS8Q9BT25 410 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 SLC29A3Q9BZD2 475 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 UNKQ9C0B0 810 aaKnown RBP7.79□□□□□ -1.16
DNMT1-219ENST00000589349 PITHD1Q9GZP4 211 aaPredicted RBP7.79□□□□□ -1.16
DNMT1-219ENST00000589349 EPS8L2Q9H6S3 715 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 WDR54Q9H977 334 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 ANKHQ9HCJ1 492 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 TMEM184CQ9NVA4 438 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 HCN3Q9P1Z3 774 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 RNF14Q9UBS8 474 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 PDE10AQ9Y233 779 aa7.79□□□□□ -1.16
DNMT1-219ENST00000589349 UTP11Q9Y3A2 253 aaKnown RBP7.79□□□□□ -1.16
DNMT1-219ENST00000589349 NCF1BA6NI72 391 aaPredicted RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 A8MUI8 341 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 NCF1CA8MVU1 366 aaPredicted RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 H3BMH7 237 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 GFYI3L273 518 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 SGK494L7N484 410 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 EIF3FO00303 357 aaPredicted RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 CLGNO14967 610 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 SLC16A5O15375 505 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 PIAS1O75925 651 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 SEC31AO94979 1220 aaKnown RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 F10P00742 488 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 S100BP04271 92 aaPredicted RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 NCF1P14598 390 aaPredicted RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 IL1RNP18510 177 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 CCND1P24385 295 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 HRH2P25021 359 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 GABRB3P28472 473 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 RPL21P46778 160 aaKnown RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 CCR8P51685 355 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 PLTPP55058 493 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 RPS15AP62244 130 aaKnown RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 ARG2P78540 354 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 ACTN3Q08043 901 aaPredicted RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 CDC16Q13042 620 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 SP140Q13342 867 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 PRR30Q53SZ7 412 aaPredicted RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 FHL5Q5TD97 284 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 KIRREL2Q6UWL6 708 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 RAPH1Q70E73 1250 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 COX15Q7KZN9 410 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 ASPGQ86U10 573 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 HPS6Q86YV9 775 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 IQCKQ8N0W5 287 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 CAMKVQ8NCB2 501 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 OR9A4Q8NGU2 314 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 SLC13A3Q8WWT9 602 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 ATL1Q8WXF7 558 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 SLCO2A1Q92959 643 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 EXT2Q93063 718 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 PNPLA2Q96AD5 504 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 LRRC39Q96DD0 335 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 SMAD5Q99717 465 aaKnown RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 LHPPQ9H008 270 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 RHBGQ9H310 441 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 C12orf65Q9H3J6 166 aaKnown RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 MKKSQ9NPJ1 570 aaPredicted RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 C5AR2Q9P296 337 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 PTGFRNQ9P2B2 879 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 CTNNAL1Q9UBT7 734 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 B3GNT3Q9Y2A9 372 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 HS3ST3B1Q9Y662 390 aa7.78□□□□□ -1.16
DNMT1-219ENST00000589349 COPG1Q9Y678 874 aaKnown RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 TNRC6AQ8NDV7 1962 aaKnown RBP7.78□□□□□ -1.16
DNMT1-219ENST00000589349 IGKV1-8A0A0C4DH67 115 aa7.77□□□□□ -1.17
DNMT1-219ENST00000589349 DYTNA2CJ06 578 aa7.77□□□□□ -1.17
DNMT1-219ENST00000589349 ZNF860A6NHJ4 632 aa7.77□□□□□ -1.17
DNMT1-219ENST00000589349 IDSB3KWA1 339 aa7.77□□□□□ -1.17
DNMT1-219ENST00000589349 SOCS6O14544 535 aa7.77□□□□□ -1.17
DNMT1-219ENST00000589349 P2RX6O15547 441 aa7.77□□□□□ -1.17
DNMT1-219ENST00000589349 NDUFS4O43181 175 aa7.77□□□□□ -1.17
DNMT1-219ENST00000589349 CDC14BO60729 498 aa7.77□□□□□ -1.17
DNMT1-219ENST00000589349 CDC123O75794 336 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms