RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 CCDC63Q8NA47 563 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 HAS2Q92819 552 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 SNRNP40Q96DI7 357 aaKnown RBP13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 C19orf60Q96EN9 201 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 TMEM237Q96Q45 408 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 ABI3Q9P2A4 366 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 EMCNQ9ULC0 261 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 GRID1Q9ULK0 1009 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 SNX6Q9UNH7 406 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 COPG1Q9Y678 874 aaKnown RBP13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 FASNP49327 2511 aaKnown RBP13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 SCN3AQ9NY46 2000 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 TGFBR3LH3BV60 316 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 LDB3O75112 727 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 EEDO75530 441 aaKnown RBP13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 OR4F21O95013 312 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 ZIC2O95409 532 aaPredicted RBP13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 NUDT17P0C025 328 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 KRT4P19013 534 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 TNNI3P19429 210 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 CRHR1P34998 444 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 BSGP35613 385 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 ARFIP1P53367 373 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 ID2Q02363 134 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 MEP1AQ16819 746 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 CCDC153Q494R4 210 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 C10orf62Q5T681 223 aaPredicted RBP13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 H3F3CQ6NXT2 135 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 CYP20A1Q6UW02 462 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 SH2D5Q6ZV89 423 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 NUDT13Q86X67 352 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 C4orf33Q8N1A6 199 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 BEST3Q8N1M1 668 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 ZCCHC7Q8N3Z6 543 aaKnown RBP13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 CCNYL1Q8N7R7 359 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 NFAM1Q8NET5 270 aaPredicted RBP13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 SUN3Q8TAQ9 357 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 ELP5Q8TE02 316 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 SELENOMQ8WWX9 145 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 CAVIN3Q969G5 261 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 CCDC126Q96EE4 140 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 PARD6BQ9BYG5 372 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 ALOXE3Q9BYJ1 711 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 CDCP1Q9H5V8 836 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 MS4A12Q9NXJ0 267 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 TRPS1Q9UHF7 1281 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 PHF11Q9UIL8 331 aa13.19□□□□□ -0.3
CLPTM1-210ENST00000589158 TRAV17A0A0B4J275 112 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 BLACEA4D250 179 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 SYNDIG1LA6NDD5 238 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 OR5H15A6NDH6 313 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 G3V2L1 256 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 MLYCDO95822 493 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 PDYNP01213 254 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 GBAP04062 536 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 PROCP04070 461 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 FAM58BPP0C7Q3 252 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 TLX1P31314 330 aaPredicted RBP13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 ST13P50502 369 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 TNFSF10P50591 281 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 TERF2Q15554 542 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 ZYG11AQ6WRX3 759 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 GPRIN3Q6ZVF9 776 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 RPS19BP1Q86WX3 136 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 OR4N5Q8IXE1 308 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 TMEM132CQ8N3T6 1108 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 RIBC1Q8N443 379 aaPredicted RBP13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 CDYL2Q8N8U2 506 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 GALNT11Q8NCW6 608 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 B3GNT7Q8NFL0 401 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 MYRIPQ8NFW9 859 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 METTL6Q8TCB7 284 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 L3HYPDHQ96EM0 354 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 ZNF382Q96SR6 550 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 DEFB126Q9BYW3 111 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 SLC29A3Q9BZD2 475 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 RNF32Q9H0A6 362 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 C12orf65Q9H3J6 166 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 RPF2Q9H7B2 306 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 DDX31Q9H8H2 851 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 ADAP2Q9NPF8 381 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 FARSBQ9NSD9 589 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 ASF1BQ9NVP2 202 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 LYARQ9NX58 379 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 AHSPQ9NZD4 102 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 ZNF225Q9UK10 706 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 PPT2Q9UMR5 302 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 SLC12A4Q9UP95 1085 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 STK38LQ9Y2H1 464 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 ATG4BQ9Y4P1 393 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 CLDN16Q9Y5I7 305 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 CLCA3PQ9Y6N3 262 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 HELZ2Q9BYK8 2649 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 TENM4Q6N022 2769 aa13.18□□□□□ -0.3
CLPTM1-210ENST00000589158 NUP210LQ5VU65 1888 aa13.17□□□□□ -0.3
CLPTM1-210ENST00000589158 A0A0A6YYD5 115 aa13.17□□□□□ -0.3
CLPTM1-210ENST00000589158 TRBV11-1A0A0K0K1C0 115 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms