RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZNF750Q32MQ0 723 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 NDUFAF5Q5TEU4 345 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 PAOXQ6QHF9 649 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 ADGRD1Q6QNK2 874 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 HSDL2Q6YN16 418 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 RTL4Q6ZR62 310 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 GK5Q6ZS86 529 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 ADAMTSL2Q86TH1 951 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 TMEM132CQ8N3T6 1108 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 FAM109AQ8N4B1 249 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 NKAPQ8N5F7 415 aaKnown RBP17.05■□□□□ 0.32
CCDC43-204ENST00000588687 GOLM1Q8NBJ4 401 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 MORN4Q8NDC4 146 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 OR8K3Q8NH51 312 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 SREK1Q8WXA9 508 aaKnown RBP17.05■□□□□ 0.32
CCDC43-204ENST00000588687 SERINC2Q96SA4 455 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 EGFL8Q99944 293 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 FAM173AQ9BQD7 235 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 REXO4Q9GZR2 422 aaKnown RBP17.05■□□□□ 0.32
CCDC43-204ENST00000588687 DDX47Q9H0S4 455 aaKnown RBP17.05■□□□□ 0.32
CCDC43-204ENST00000588687 IL1RL2Q9HB29 575 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 VTI1BQ9UEU0 232 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 Q9UFV3 132 aa17.05■□□□□ 0.32
CCDC43-204ENST00000588687 MRPS33Q9Y291 106 aaKnown RBP17.05■□□□□ 0.32
CCDC43-204ENST00000588687 MYOCOSA0A1B0GUC4 107 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 FAM95CA0A1B0GW59 222 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 SYNDIG1LA6NDD5 238 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 FIGNL2A6NMB9 653 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 AQP7O14520 342 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 TAPBPO15533 448 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 DIAPH2O60879 1101 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 CTNSO60931 367 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 CCL3P10147 92 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 IST1P53990 364 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 MTTPP55157 894 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 B3GNT6Q6ZMB0 384 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 ZNF793Q6ZN11 406 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 UBE3DQ7Z6J8 389 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 OR14A16Q8NHC5 309 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 WDR34Q96EX3 536 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 CAPZA3Q96KX2 299 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 PITHD1Q9GZP4 211 aaPredicted RBP17.04■□□□□ 0.32
CCDC43-204ENST00000588687 EHD1Q9H4M9 534 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 SH2D2AQ9NP31 389 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 PRDM7Q9NQW5 492 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 ZNF490Q9ULM2 529 aaPredicted RBP17.04■□□□□ 0.32
CCDC43-204ENST00000588687 CLCA3PQ9Y6N3 262 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 ABCA4P78363 2273 aa17.04■□□□□ 0.32
CCDC43-204ENST00000588687 GOLGA6L10A0A0M3HER8 536 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 EPORP19235 508 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 CNR1P21554 472 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 GGT5P36269 586 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 DNASE1L1P49184 302 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 RNF4P78317 190 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 MORF4L2Q15014 288 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 TGFBIQ15582 683 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 TRIM40Q6P9F5 258 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 SLC2A12Q8TD20 617 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 CCT6BQ92526 530 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 DAZLQ92904 295 aaKnown RBP17.03■□□□□ 0.32
CCDC43-204ENST00000588687 LRRC39Q96DD0 335 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 OR8D2Q9GZM6 311 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 SEMA4BQ9NPR2 832 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-204ENST00000588687 ZNF358Q9NW07 568 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 TUBA8Q9NY65 449 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-204ENST00000588687 GPRC5BQ9NZH0 403 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 SPRR3Q9UBC9 169 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 ATG4BQ9Y4P1 393 aa17.03■□□□□ 0.32
CCDC43-204ENST00000588687 A0A088AWK7 358 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 FAM221AA4D161 298 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 CES2O00748 559 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 SUSD5O60279 629 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 CTAG2O75638 210 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 ETHE1O95571 254 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 ZNF10P21506 573 aaPredicted RBP17.02■□□□□ 0.32
CCDC43-204ENST00000588687 MYBPHQ13203 477 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 BMPR2Q13873 1038 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 E2F2Q14209 437 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 FASTKD3Q14CZ7 662 aaKnown RBP17.02■□□□□ 0.32
CCDC43-204ENST00000588687 CES4AQ5XG92 561 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 ZNF585AQ6P3V2 769 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 LYPD8Q6UX82 237 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 CLYBLQ8N0X4 340 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 PDIK1LQ8N165 341 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 KRT78Q8N1N4 520 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 ZNF721Q8TF20 911 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 NINJ1Q92982 152 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 SGCZQ96LD1 299 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 FOXC2Q99958 501 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 ALOXE3Q9BYJ1 711 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 ZNF703Q9H7S9 590 aaPredicted RBP17.02■□□□□ 0.32
CCDC43-204ENST00000588687 POPDC3Q9HBV1 291 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 SLC24A3Q9HC58 644 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 LYRM4Q9HD34 91 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 MOCS1Q9NZB8 636 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 CTNNAL1Q9UBT7 734 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 SNX12Q9UMY4 172 aa17.02■□□□□ 0.32
CCDC43-204ENST00000588687 NSD1Q96L73 2696 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-204ENST00000588687 NCF1BA6NI72 391 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-204ENST00000588687 NCF1CA8MVU1 366 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms