RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 DNASE1L1P49184 302 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 GPR143P51810 404 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 HK2P52789 917 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 DOC2AQ14183 400 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 RCN2Q14257 317 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 PDK4Q16654 411 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 ABHD17CQ6PCB6 329 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 GK5Q6ZS86 529 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 FAM47EQ6ZV65 393 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 SLC22A16Q86VW1 577 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 GPALPP1Q8IXQ4 340 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 ARMC10Q8N2F6 343 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 OR14A16Q8NHC5 309 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 ANKRD7Q92527 254 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 PTCD3Q96EY7 689 aaKnown RBP12.72□□□□□ -0.37
HDAC5-208ENST00000588419 SEC16BQ96JE7 1060 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 SMC6Q96SB8 1091 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 CAPS2Q9BXY5 557 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 DERL2Q9GZP9 239 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 DPH5Q9H2P9 285 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 POPDC3Q9HBV1 291 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 SMYD2Q9NRG4 433 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 GPRC5BQ9NZH0 403 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 MYOTQ9UBF9 498 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 RNF112Q9ULX5 631 aa12.72□□□□□ -0.37
HDAC5-208ENST00000588419 CCDC168Q8NDH2 2452 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 C2CD3Q4AC94 2353 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 EXPH5Q8NEV8 1989 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 TMEM200CA6NKL6 621 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 SAP18O00422 153 aaKnown RBP12.71□□□□□ -0.37
HDAC5-208ENST00000588419 PRAMEF4O60810 478 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 STK16O75716 305 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 CAPN3P20807 821 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 SSTR1P30872 391 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 GMPRP36959 345 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 SSR2P43308 183 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 MAGEA5P43359 124 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 RPL21P46778 160 aaKnown RBP12.71□□□□□ -0.37
HDAC5-208ENST00000588419 POU4F1Q01851 419 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 IRF8Q02556 426 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 MYBPHQ13203 477 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 DDX39BQ13838 428 aaKnown RBP12.71□□□□□ -0.37
HDAC5-208ENST00000588419 FRG1Q14331 258 aaKnown RBP12.71□□□□□ -0.37
HDAC5-208ENST00000588419 OR4D1Q15615 310 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 HIST2H2ACQ16777 129 aaPredicted RBP12.71□□□□□ -0.37
HDAC5-208ENST00000588419 PRAMEF9Q5VWM5 478 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 HIST2H2AA3Q6FI13 130 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 SULT1C3Q6IMI6 304 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 RTL4Q6ZR62 310 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 SLC2A12Q8TD20 617 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 DOK4Q8TEW6 326 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 CDKL2Q92772 493 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 TSPAN17Q96FV3 270 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 SCYL1Q96KG9 808 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 KRT12Q99456 494 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 MAPKAP1Q9BPZ7 522 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 ZNF559Q9BR84 538 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 LDAHQ9H6V9 325 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 NT5DC2Q9H857 520 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 SAYSD1Q9NPB0 183 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 KCNJ16Q9NPI9 418 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
HDAC5-208ENST00000588419 ALKBH4Q9NXW9 302 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 MOCS1Q9NZB8 636 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 COPS7AQ9UBW8 275 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 PPIEQ9UNP9 301 aaKnown RBP12.71□□□□□ -0.37
HDAC5-208ENST00000588419 SPACA6W5XKT8 324 aa12.71□□□□□ -0.37
HDAC5-208ENST00000588419 ADGRG4Q8IZF6 3080 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 ATP6AP2A0A1C7CYW4 349 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 CXorf49A8MYA2 514 aaPredicted RBP12.7□□□□□ -0.38
HDAC5-208ENST00000588419 SUPT3HB4E1H0 165 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 CYR61O00622 381 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 CTNSO60931 367 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 SUPT3HO75486 399 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 ATP6AP2O75787 350 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 TBX6O95947 436 aaPredicted RBP12.7□□□□□ -0.38
HDAC5-208ENST00000588419 P04436 131 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 CD1DP15813 335 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 STMN1P16949 149 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 CD22P20273 847 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 CPN2P22792 545 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 PAFAH1B1P43034 410 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 KCNC1P48547 511 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 GNG11P61952 73 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 RNF4P78317 190 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 CHIT1Q13231 466 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 SLMAPQ14BN4 828 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 EFTUD2Q15029 972 aaKnown RBP eCLIP12.7□□□□□ -0.381e-6■■■■■ 27.9
HDAC5-208ENST00000588419 GXYLT1Q4G148 440 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 EMC4Q5J8M3 183 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 PAGE2BQ5JRK9 111 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 ZNF793Q6ZN11 406 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 MYLK4Q86YV6 388 aaPredicted RBP12.7□□□□□ -0.38
HDAC5-208ENST00000588419 CTAGE3PQ8IX95 158 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 OR4N5Q8IXE1 308 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 FAM109AQ8N4B1 249 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 TMEM251Q8N6I4 163 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 MORN4Q8NDC4 146 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 PYROXD1Q8WU10 500 aa12.7□□□□□ -0.38
HDAC5-208ENST00000588419 PTPMT1Q8WUK0 201 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms