RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PSMA8Q8TAA3 256 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ADAMTS16Q8TE57 1224 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 HMGB4Q8WW32 186 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 TSACCQ96A04 125 aaPredicted RBP10.71□□□□□ -0.69
LIG3-204ENST00000585740 MS4A6EQ96DS6 147 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 FBXL20Q96IG2 436 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 EPYCQ99645 322 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 PRRX2Q99811 253 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 GSDMCQ9BYG8 508 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 GRIP2Q9C0E4 1043 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ING2Q9H160 280 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 SRMSQ9H3Y6 488 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 TOR3AQ9H497 397 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 C5orf42Q9H799 3197 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 CXorf36Q9H7Y0 433 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ZDBF2Q9HCK1 2354 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 LHX9Q9NQ69 397 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 LYARQ9NX58 379 aaKnown RBP10.71□□□□□ -0.69
LIG3-204ENST00000585740 KLF15Q9UIH9 416 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 PCDHGA4Q9Y5G9 962 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ZFHX2Q9C0A1 2572 aaPredicted RBP10.71□□□□□ -0.7
LIG3-204ENST00000585740 A6NCN8 305 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 TMEM247A6NEH6 219 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 TMEM221A6NGB7 291 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 CHURC1-FNTBB4DL54 471 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 C5orf58C9J3I9 102 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 M0R296 226 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 ADAMDEC1O15204 470 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 SLC16A6O15403 523 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 KIF1CO43896 1103 aaKnown RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 TMPRSS11DO60235 418 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 C9P02748 559 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 GNAO1P09471 354 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 NUDT7P0C024 238 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 HIST1H1TP22492 207 aaPredicted RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 AK4P27144 223 aaPredicted RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 TTKP33981 857 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 SLC19A1P41440 591 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 PLA2G16P53816 162 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 KCNJ10P78508 379 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 EEF1A2Q05639 463 aaKnown RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 SLC5A12Q1EHB4 618 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 PRSS53Q2L4Q9 553 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 ALG11Q2TAA5 492 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 CNPY1Q3B7I2 92 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 ZIK1Q3SY52 487 aaPredicted RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 SPDYE7PQ495Y7 208 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 NADK2Q4G0N4 442 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 PRRT3Q5FWE3 981 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 COX20Q5RI15 118 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 MRM1Q6IN84 353 aaKnown RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 REEP3Q6NUK4 255 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 ABHD17CQ6PCB6 329 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 BHLHB9Q6PI77 547 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 ZNF852Q6ZMS4 543 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 Q6ZSR6 202 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 RD3Q7Z3Z2 195 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 SATL1Q86VE3 508 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 DCP2Q8IU60 420 aaKnown RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 ARMC8Q8IUR7 673 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 ALDH16A1Q8IZ83 802 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 OR4E2Q8NGC2 313 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 NFKBIDQ8NI38 313 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 NT5CQ8TCD5 201 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 SFXN5Q8TD22 340 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 GEMIN6Q8WXD5 167 aaKnown RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 HDAC2Q92769 488 aaKnown RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 GAL3ST3Q96A11 431 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 EXOSC8Q96B26 276 aaKnown RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 MOAP1Q96BY2 351 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 TPD52L3Q96J77 140 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 NRTNQ99748 197 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 TRIM4Q9C037 500 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 TWSG1Q9GZX9 223 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 RUBCNLQ9H714 662 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 SMURF2Q9HAU4 748 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 A4GALTQ9NPC4 353 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 THSD1Q9NS62 852 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 SEMA3GQ9NS98 782 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 GIMAP4Q9NUV9 329 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 POT1Q9NUX5 634 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 DDX18Q9NVP1 670 aaKnown RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 DNAAF2Q9NVR5 837 aaKnown RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 GPATCH2Q9NW75 528 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 FAM118AQ9NWS6 357 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 SPHK1Q9NYA1 384 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 ZNF624Q9P2J8 865 aaPredicted RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 UTS2RQ9UKP6 389 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 BLOC1S6Q9UL45 172 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 ABCG2Q9UNQ0 655 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 SAMHD1Q9Y3Z3 626 aaKnown RBP10.7□□□□□ -0.7
LIG3-204ENST00000585740 MAP4K5Q9Y4K4 846 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 PCDHGB3Q9Y5G1 929 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 ENTPD2Q9Y5L3 495 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 COMMD3-BMI1R4GMX3 469 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 HSPE1-MOB4S4R3N1 261 aa10.7□□□□□ -0.7
LIG3-204ENST00000585740 TECTAO75443 2155 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 KIR2DS5A0A0G2JLQ3 304 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 A0A0G2JNG1 304 aa10.69□□□□□ -0.7
LIG3-204ENST00000585740 URADA6NGE7 173 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms