RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 LRRTM2O43300 516 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 ABHD2P08910 425 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 TNNI3P19429 210 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 CPN2P22792 545 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 TPP2P29144 1249 aaPredicted RBP11.56□□□□□ -0.56
SS18-225ENST00000585121 ECHS1P30084 290 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 MAGEA12P43365 314 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 CCNG1P51959 295 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 BIKQ13323 160 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 CPSF6Q16630 551 aaKnown RBP eCLIP11.56□□□□□ -0.56
SS18-225ENST00000585121 MAPKAPK3Q16644 382 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 C4orf17Q53FE4 359 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 ZNF324BQ6AW86 544 aaPredicted RBP11.56□□□□□ -0.56
SS18-225ENST00000585121 SLC25A25Q6KCM7 469 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 GOLGA7Q7Z5G4 137 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 UBE3DQ7Z6J8 389 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 CNPY4Q8N129 248 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 PLD6Q8N2A8 252 aaKnown RBP11.56□□□□□ -0.56
SS18-225ENST00000585121 MDS2Q8NDY4 140 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 DCAKDQ8WVC6 231 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 NCLNQ969V3 563 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 PHF21BQ96EK2 531 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 SIGLEC12Q96PQ1 595 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 MTERF1Q99551 399 aaKnown RBP11.56□□□□□ -0.56
SS18-225ENST00000585121 MAPKAP1Q9BPZ7 522 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 MRPL57Q9BQC6 102 aaKnown RBP11.56□□□□□ -0.56
SS18-225ENST00000585121 OR51B5Q9H339 312 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 DMRT3Q9NQL9 472 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 SEC14L3Q9UDX4 400 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 PLEKHB1Q9UF11 243 aaPredicted RBP11.56□□□□□ -0.56
SS18-225ENST00000585121 TSC22D4Q9Y3Q8 395 aa11.56□□□□□ -0.56
SS18-225ENST00000585121 A0A1B0GUH1 482 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 LRRC14BA6NHZ5 514 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 H0YIV9 168 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 STX16-NPEPL1H3BU86 382 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 DYNC1I1O14576 645 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 STX16O14662 325 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 DYRK3O43781 588 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 MAN1A2O60476 641 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 SLC25A12O75746 678 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 ZFAND5O76080 213 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 SCELO95171 688 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 SIX3O95343 332 aaPredicted RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 CLDN9O95484 217 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 SP1P08047 785 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 RHOXF2BP0C7M4 288 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 COX7A2P14406 83 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 TRHRP34981 398 aaPredicted RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 ST13P50502 369 aaKnown RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 HLCSP50747 726 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 HNRNPFP52597 415 aaKnown RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 ARFIP1P53367 373 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 RPS13P62277 151 aaKnown RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 SLAMF1Q13291 335 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.55□□□□□ -0.56
SS18-225ENST00000585121 TTC19Q6DKK2 380 aaPredicted RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 ZNF793Q6ZN11 406 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 TMEM156Q8N614 296 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 L3MBTL4Q8NA19 623 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 APCDD1LQ8NCL9 501 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 MORN4Q8NDC4 146 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 TMEM52Q8NDY8 209 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 OR14A16Q8NHC5 309 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 THAP3Q8WTV1 239 aaPredicted RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 MTBPQ96DY7 904 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 SCMH1Q96GD3 660 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 CSF3RQ99062 836 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 RHOXF2Q9BQY4 288 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 MRPL46Q9H2W6 279 aaKnown RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 NOL11Q9H8H0 719 aaKnown RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 ZNF358Q9NW07 568 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 KCMF1Q9P0J7 381 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 XPR1Q9UBH6 696 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 VTI1BQ9UEU0 232 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 PHF11Q9UIL8 331 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 FOXE1O00358 373 aaPredicted RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 UNC5CO95185 931 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 LDLRP01130 860 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 STSP08842 583 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 TAC1P20366 129 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 PPP2R1BP30154 601 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 BUD31P41223 144 aaPredicted RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 TDGF1P3P51864 188 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 CASP6P55212 293 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 KCNK10P57789 538 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 ALDH6A1Q02252 535 aaKnown RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 ZRSR2Q15696 482 aaKnown RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 KRTCAP3Q53RY4 240 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 C10orf62Q5T681 223 aaPredicted RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 CYP20A1Q6UW02 462 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 GALNTL5Q7Z4T8 443 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 GPR180Q86V85 440 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 TANKQ92844 425 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 LYARQ9NX58 379 aaKnown RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 PSD3Q9NYI0 1048 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 COPS7AQ9UBW8 275 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 PPIEQ9UNP9 301 aaKnown RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 YARS2Q9Y2Z4 477 aaKnown RBP11.55□□□□□ -0.56
SS18-225ENST00000585121 RNF11Q9Y3C5 154 aa11.55□□□□□ -0.56
SS18-225ENST00000585121 DOPEY1Q5JWR5 2465 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms