RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 STX16-NPEPL1H3BU86 382 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 CLDN4O14493 209 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 STX16O14662 325 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 NME2P1O60361 137 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 MYO1DO94832 1006 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 UQCRHP07919 91 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 SP1P08047 785 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 SNRPAP09012 282 aaKnown RBP16.13■□□□□ 0.17
SMG6-212ENST00000573153 NME2P22392 152 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 HIST1H1TP22492 207 aaPredicted RBP16.13■□□□□ 0.17
SMG6-212ENST00000573153 TAS2R50P59544 299 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 IGLV3-21P80748 117 aaPredicted RBP16.13■□□□□ 0.17
SMG6-212ENST00000573153 GTF2H2Q13888 395 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 ELOAQ14241 798 aaKnown RBP16.13■□□□□ 0.17
SMG6-212ENST00000573153 DEPDC1Q5TB30 811 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 C1QL3Q5VWW1 255 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 KHDRBS2Q5VWX1 349 aaKnown RBP16.13■□□□□ 0.17
SMG6-212ENST00000573153 GTF2H2CQ6P1K8 395 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 ADGRD1Q6QNK2 874 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 C16orf47Q6ZP98 133 aaPredicted RBP16.13■□□□□ 0.17
SMG6-212ENST00000573153 CHSY3Q70JA7 882 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 GALNTL5Q7Z4T8 443 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 CLNKQ7Z7G1 428 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 ZNF321PQ8N8H1 164 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 HUS1BQ8NHY5 278 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 WDR20Q8TBZ3 569 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 PTPMT1Q8WUK0 201 aaPredicted RBP16.13■□□□□ 0.17
SMG6-212ENST00000573153 COPS7BQ9H9Q2 264 aaPredicted RBP16.13■□□□□ 0.17
SMG6-212ENST00000573153 ZBTB26Q9HCK0 441 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 ADAP2Q9NPF8 381 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 DMRT3Q9NQL9 472 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 KLHL1Q9NR64 748 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 LRFN1Q9P244 771 aa16.13■□□□□ 0.17
SMG6-212ENST00000573153 TRBV11-1A0A0K0K1C0 115 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 A0A1B0GTL3 188 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 MYOCOSA0A1B0GUC4 107 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 EXOC1LA0A1B0GW35 172 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 TRIM49D1C9J1S8 452 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 POC1B-GALNT4F8VUJ3 575 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 PLPP1O14494 284 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 RIPK2O43353 540 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 ZNF354AO60765 605 aaPredicted RBP16.12■□□□□ 0.17
SMG6-212ENST00000573153 CTNSO60931 367 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 SH3BGRLO75368 114 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 UNC5CO95185 931 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 TGFB1P01137 390 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 ZRSR2Q15696 482 aaKnown RBP16.12■□□□□ 0.17
SMG6-212ENST00000573153 SLC25A25Q6KCM7 469 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 GOLGA7Q7Z5G4 137 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 FGD2Q7Z6J4 655 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 LCA5Q86VQ0 697 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 C7orf57Q8NEG2 295 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 NCLNQ969V3 563 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 REPS1Q96D71 796 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 MTBPQ96DY7 904 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 MRPL57Q9BQC6 102 aaKnown RBP16.12■□□□□ 0.17
SMG6-212ENST00000573153 OR51B5Q9H339 312 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 L2HGDHQ9H9P8 463 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 CPSF2Q9P2I0 782 aaKnown RBP16.12■□□□□ 0.17
SMG6-212ENST00000573153 XPR1Q9UBH6 696 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 VTI1BQ9UEU0 232 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 ZNF835Q9Y2P0 537 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 ANGPTL3Q9Y5C1 460 aa16.12■□□□□ 0.17
SMG6-212ENST00000573153 DIDO1Q9BTC0 2240 aaKnown RBP16.11■□□□□ 0.17
SMG6-212ENST00000573153 SAP18O00422 153 aaKnown RBP16.11■□□□□ 0.17
SMG6-212ENST00000573153 OR7A17O14581 309 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 ZG16O60844 167 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 CRYABP02511 175 aaKnown RBP16.11■□□□□ 0.17
SMG6-212ENST00000573153 PCNAP12004 261 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 HLCSP50747 726 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 HNRNPH2P55795 449 aaKnown RBP16.11■□□□□ 0.17
SMG6-212ENST00000573153 ELAVL1Q15717 326 aaKnown RBP16.11■□□□□ 0.17
SMG6-212ENST00000573153 C10orf62Q5T681 223 aaPredicted RBP16.11■□□□□ 0.17
SMG6-212ENST00000573153 LGSNQ5TDP6 509 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 ZNF787Q6DD87 383 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 MRM1Q6IN84 353 aaKnown RBP16.11■□□□□ 0.17
SMG6-212ENST00000573153 GFRALQ6UXV0 394 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 DGAT2L6Q6ZPD8 337 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 PTGR2Q8N8N7 351 aaPredicted RBP16.11■□□□□ 0.17
SMG6-212ENST00000573153 LRRN4CLQ8ND94 238 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 SUN3Q8TAQ9 357 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 VMP1Q96GC9 406 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 GPR137Q96N19 417 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 NTMT1Q9BV86 223 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 C1QTNF3Q9BXJ4 246 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 MRPL46Q9H2W6 279 aaKnown RBP16.11■□□□□ 0.17
SMG6-212ENST00000573153 EPB41L4BQ9H329 900 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 IPPKQ9H8X2 491 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 ACTR8Q9H981 624 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 PNO1Q9NRX1 252 aaKnown RBP16.11■□□□□ 0.17
SMG6-212ENST00000573153 PCTPQ9UKL6 214 aa16.11■□□□□ 0.17
SMG6-212ENST00000573153 NCOA6Q14686 2063 aaPredicted RBP16.1■□□□□ 0.17
SMG6-212ENST00000573153 FOXE1O00358 373 aaPredicted RBP16.1■□□□□ 0.17
SMG6-212ENST00000573153 FGF17O60258 216 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 LDB3O75112 727 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 SLC25A12O75746 678 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 FAM153BP0C7A2 387 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 RHOXF2BP0C7M4 288 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 PTX3P26022 381 aaPredicted RBP16.1■□□□□ 0.17
SMG6-212ENST00000573153 EEF1DP29692 281 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms