RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PTGR1Q14914 329 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 NDUFAF5Q5TEU4 345 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 C6orf163Q5TEZ5 329 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 OR52E8Q6IFG1 317 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 RHBDD2Q6NTF9 364 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 PWWP2BQ6NUJ5 590 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF793Q6ZN11 406 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 DGLUCYQ7Z3D6 616 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 GPR180Q86V85 440 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 BMPERQ8N8U9 685 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAM47BQ8NA70 645 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 GLB1L3Q8NCI6 653 aaPredicted RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 C16orf78Q8WTQ4 265 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ADAMTS14Q8WXS8 1223 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 GFM2Q969S9 779 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 KLHL29Q96CT2 875 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF837Q96EG3 531 aaPredicted RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 FCRL1Q96LA6 429 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 TAAR9Q96RI9 348 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 DPH2Q9BQC3 489 aaPredicted RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 NPLQ9BXD5 320 aaPredicted RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 RBCK1Q9BYM8 510 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 BRINP2Q9C0B6 783 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 DDX31Q9H8H2 851 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 SYNPO2LQ9H987 977 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 CLK4Q9HAZ1 481 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF304Q9HCX3 659 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 LYRM4Q9HD34 91 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 APMAPQ9HDC9 416 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 FBXO8Q9NRD0 319 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 C14orf105Q9NVL8 296 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 SIRT5Q9NXA8 310 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZIM2Q9NZV7 527 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 ARMCX1Q9P291 453 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 TRPC4Q9UBN4 977 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 SATB2Q9UPW6 733 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 WBP11Q9Y2W2 641 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 MAU2Q9Y6X3 613 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 CACNA1HO95180 2353 aa6.23□□□□□ -1.41
CTDNEP1-204ENST00000570484 DYTNA2CJ06 578 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAM234BA2RU67 622 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 DCDC2BA2VCK2 349 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 SYNDIG1LA6NDD5 238 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 CCDC154A6NI56 674 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 BBIP1A8MTZ0 92 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 TGFBR3LH3BV60 316 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 EBAG9O00559 213 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 CLDN4O14493 209 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 TM4SF5O14894 197 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 CFLARO15519 480 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 PDPK1O15530 556 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 EFSO43281 561 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 TMPRSS11DO60235 418 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 STK17BO94768 372 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 TNFSF15O95150 251 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 AIFM1O95831 613 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 TBX6O95947 436 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 NTRK1P04629 796 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 CTSBP07858 339 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 FHP07954 510 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 DRD2P14416 443 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 DDCP20711 480 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 ADSLP30566 484 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 S100A3P33764 101 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 PLA2G5P39877 138 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 KIR3DL1P43629 444 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 XCR1P46094 333 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 POLR2JP52435 117 aaKnown RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 LIM2P55344 173 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 HNRNPH2P55795 449 aaKnown RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 RAE1P78406 368 aaKnown RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 DCDP81605 110 aaKnown RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 MXRA7P84157 204 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 MAT1AQ00266 395 aaKnown RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 OCA2Q04671 838 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 C2orf80Q0P641 193 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 COL9A2Q14055 689 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 KIAA0040Q15053 153 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 TERF2Q15554 542 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 PGS1Q32NB8 556 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 FAM174BQ3ZCQ3 159 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 MMEL1Q495T6 779 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 MINDY4Q4G0A6 757 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 TIGD2Q4W5G0 525 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 AGKQ53H12 422 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRAMEF17Q5VTA0 474 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 PAOXQ6QHF9 649 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 GK5Q6ZS86 529 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRSS41Q7RTY9 318 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 TRPM8Q7Z2W7 1104 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 UBE3DQ7Z6J8 389 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 CLNKQ7Z7G1 428 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 PDSS2Q86YH6 399 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 SAMD14Q8IZD0 417 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 CACTIN-AS1Q8N1I8 211 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 CA13Q8N1Q1 262 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 VPS37AQ8NEZ2 397 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZFP28Q8NHY6 868 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 MR1Q95460 341 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 EXOSC8Q96B26 276 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms