RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ACTL6BO94805 426 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 EGFP01133 1207 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 APOA1P02647 267 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 ZSCAN5DPP0CG00 497 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 ERCC2P18074 760 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 ZNF77Q15935 545 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 C3orf36Q3SXR2 165 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 KLHL22Q53GT1 634 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 FASTKD1Q53R41 847 aaKnown RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 KHDRBS2Q5VWX1 349 aaKnown RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 IL20RBQ6UXL0 311 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 CLEC9AQ6UXN8 241 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 GDPD4Q6W3E5 623 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 NUDCD3Q8IVD9 361 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 FAM217AQ8IXS0 508 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 UNC5BQ8IZJ1 945 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 OR52N1Q8NH53 320 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 NDRG1Q92597 394 aaKnown RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 TCEAL4Q96EI5 215 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 PEBP4Q96S96 227 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 PAAF1Q9BRP4 392 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 SMOC2Q9H3U7 446 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 SMURF2Q9HAU4 748 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 MCCC2Q9HCC0 563 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 SLC22A7Q9Y694 548 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 MARCH11A6NNE9 402 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 CCRL2O00421 344 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 HSPA12AO43301 675 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 VPS26AO75436 327 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 PROSCO94903 275 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 ATP6V1G2O95670 118 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 MT-CO3P00414 261 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 ABHD2P08910 425 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 THRBP10828 461 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 TNFRSF1AP19438 455 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 CDH5P33151 784 aaPredicted RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 NDST2P52849 883 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 RIPPLY2Q5TAB7 128 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 IL23RQ5VWK5 629 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 SLC25A25Q6KCM7 469 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 FAM171BQ6P995 826 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 ENPP7Q6UWV6 458 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 GPR137CQ8N3F9 429 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 NHLRC2Q8NBF2 726 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 SIDT2Q8NBJ9 832 aaKnown RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 RP9Q8TA86 221 aaKnown RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 VANGL1Q8TAA9 524 aaPredicted RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 NDNFQ8TB73 568 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 TP53INP1Q96A56 240 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 SRSF8Q9BRL6 282 aaKnown RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 DPH1Q9BZG8 443 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 MMP27Q9H306 513 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 GPN2Q9H9Y4 310 aaPredicted RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 TMEM30AQ9NV96 361 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 EIF3KQ9UBQ5 218 aaKnown RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 MRPS33Q9Y291 106 aaKnown RBP6.37□□□□□ -1.39
SMG1-217ENST00000569764 ARL2BPQ9Y2Y0 163 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 ZNF175Q9Y473 711 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 HS3ST4Q9Y661 456 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 TTC28Q96AY4 2481 aa6.37□□□□□ -1.39
SMG1-217ENST00000569764 SLC22A31A6NKX4 558 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 AURKAO14965 403 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 NRP2O60462 931 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 AVILO75366 819 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 GRAP2O75791 330 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 VAMP5O95183 116 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 EPS8Q12929 822 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 RUNX2Q13950 521 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 DAG1Q14118 895 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 CYP1B1Q16678 543 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 CCDC58Q4VC31 144 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 CT83Q5H943 113 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SLC26A9Q7LBE3 791 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 ADAMTSL2Q86TH1 951 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 XYLT1Q86Y38 959 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 KBTBD7Q8WVZ9 684 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 AP2M1Q96CW1 435 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 TMCO6Q96DC7 493 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 RAB3IPQ96QF0 476 aaPredicted RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 CDRT15Q96T59 188 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 MTG2Q9H4K7 406 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 VIPAS39Q9H9C1 493 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 NT5MQ9NPB1 228 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 KCNK4Q9NYG8 393 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PTGFRNQ9P2B2 879 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 RARRES3Q9UL19 164 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 TET1Q8NFU7 2136 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 RIF1Q5UIP0 2472 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 FAM237BA0A1B0GVD1 139 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 A0A1B0GVT2 93 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 MIF4GDA9UHW6 222 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 LINC00587B1AMM8 73 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 E5RI56 91 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 H0Y8G0 127 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 MATN3O15232 486 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SPRY1O43609 319 aaPredicted RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 HCRTR2O43614 444 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 NARSO43776 548 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 SEC24AO95486 1093 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 FTH1P02794 183 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms