RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TRIM3O75382 744 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 CCNDBP1O95273 360 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 TGM6O95932 706 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 CYP1A2P05177 515 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 HSP90AA1P07900 732 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 OR56A5P0C7T3 313 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 PRSS56P0CW18 603 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 CCR7P32248 378 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 CD68P34810 354 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 MTIF2P46199 727 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 ZNF140P52738 457 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 CSE1LP55060 971 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 RPS15AP62244 130 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 HSPA14Q0VDF9 509 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 KIF5AQ12840 1032 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 HERC3Q15034 1050 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 DBN1Q16643 649 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 MPEG1Q2M385 716 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 BBS9Q3SYG4 887 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 CCSMST1Q4G0I0 132 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 EIPR1Q53HC9 387 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 TBCELQ5QJ74 424 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 FOXD4L5Q5VV16 416 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 C11orf71Q6IPW1 123 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 PPP1R2P3Q6NXS1 205 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 TAS2R42Q7RTR8 314 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 REC114Q7Z4M0 266 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 KIAA1328Q86T90 577 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 GRAMD2AQ8IUY3 354 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 PLD3Q8IV08 490 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 SCUBE1Q8IWY4 988 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 GALNT12Q8IXK2 581 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 PIANPQ8IYJ0 282 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 PQLC3Q8N755 202 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 ZNF610Q8N9Z0 462 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 KCT2Q8NC54 265 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 FBXO15Q8NCQ5 510 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 OR8K3Q8NH51 312 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 GABPB2Q8TAK5 448 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 FBF1Q8TES7 1133 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 ASZ1Q8WWH4 475 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 FOXD4L4Q8WXT5 416 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 SMPDL3AQ92484 453 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 CTHRC1Q96CG8 243 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 THAP11Q96EK4 314 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 ZNF845Q96IR2 970 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 PDLIM2Q96JY6 352 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 BTBD6Q96KE9 485 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 ZNF597Q96LX8 424 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 MACROD1Q9BQ69 325 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 ZNF670Q9BS34 389 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 NDST4Q9H3R1 872 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 PCNX3Q9H6A9 2034 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 CISD1Q9NZ45 108 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 IMPACTQ9P2X3 320 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 MMACHCQ9Y4U1 282 aa5.95□□□□□ -1.46
HERPUD1-217ENST00000569429 ANKRD33BA6NCL7 494 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 KRT87PA6NCN2 255 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 F8W8V4 182 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 H7C417 338 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 PPP1R12AO14974 1030 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 EMC8O43402 210 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 GALR3O60755 368 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 AVILO75366 819 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 CRTAMO95727 393 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 ESR1P03372 595 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 ZSCAN22P10073 491 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 RBP3P10745 1247 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 COL6A2P12110 1019 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 PAMP19021 973 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 CHRM3P20309 590 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 CDK11BP21127 795 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 FOXN2P32314 431 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 RPA3P35244 121 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 BDKRB1P46663 353 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 RPL21P46778 160 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 PDLIM4P50479 330 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 EFNA4P52798 201 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 DVL1P1P54792 670 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 RNF4P78317 190 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 ABATP80404 500 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 FUT7Q11130 342 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 MPP3Q13368 585 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 MSLNQ13421 630 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 FGFBP1Q14512 234 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 PIGGQ5H8A4 983 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 MEI1Q5TIA1 1274 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 DENND5AQ6IQ26 1287 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 NIPAL1Q6NVV3 410 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 ENPP6Q6UWR7 440 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 STAC2Q6ZMT1 411 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 RINLQ6ZS11 566 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 DND1Q8IYX4 353 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 ZDHHC22Q8N966 263 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 LINC01356Q8N9X3 169 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 IPMKQ8NFU5 416 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 KBTBD8Q8NFY9 601 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 OR5L2Q8NGL0 311 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 MAGEC3Q8TD91 643 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 C3orf49Q96BT1 292 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms