RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 RTL4Q6ZR62 310 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 CDC20BQ86Y33 519 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 IGDCC3Q8IVU1 814 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 KLHDC8AQ8IYD2 350 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 TMEM132CQ8N3T6 1108 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 MYRIPQ8NFW9 859 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 PTPMT1Q8WUK0 201 aaPredicted RBP14.32□□□□□ -0.12
PALB2-205ENST00000567003 MS4A6EQ96DS6 147 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 SMR3AQ99954 134 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 EXO5Q9H790 373 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 DMRT3Q9NQL9 472 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 CLCA3PQ9Y6N3 262 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 FREM3P0C091 2139 aa14.32□□□□□ -0.12
PALB2-205ENST00000567003 LRIT2A6NDA9 550 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 KDM4EB2RXH2 506 aaPredicted RBP14.31□□□□□ -0.12
PALB2-205ENST00000567003 CLDN4O14493 209 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 B3GALT2O43825 422 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 ENO2P09104 434 aaPredicted RBP14.31□□□□□ -0.12
PALB2-205ENST00000567003 PIGAP37287 484 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 GDF5P43026 501 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 DGKQP52824 942 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 LIM2P55344 173 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 STXBP1P61764 594 aaKnown RBP14.31□□□□□ -0.12
PALB2-205ENST00000567003 ZNF460Q14592 562 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 WLSQ5T9L3 541 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 SEM1Q6ZVN7 128 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 VN1R5Q7Z5H4 357 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 CNTN4Q8IWV2 1026 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 RELL2Q8NC24 303 aaPredicted RBP14.31□□□□□ -0.12
PALB2-205ENST00000567003 CAPZA3Q96KX2 299 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 NPLQ9BXD5 320 aaPredicted RBP14.31□□□□□ -0.12
PALB2-205ENST00000567003 PLAC1Q9HBJ0 212 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 SACM1LQ9NTJ5 587 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 BOLA1Q9Y3E2 137 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 ATG4BQ9Y4P1 393 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 KCNE2Q9Y6J6 123 aa14.31□□□□□ -0.12
PALB2-205ENST00000567003 A0A1B0GTL3 188 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 A6NNC1 897 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 C17orf105B2RV13 164 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 CYR61O00622 381 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 WDR1O75083 606 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 LDB3O75112 727 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 WDR47O94967 919 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 LRATO95237 230 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 RFPL3SP0C7P2 107 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 RNF4P78317 190 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 SLC10A1Q14973 349 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 HP1BP3Q5SSJ5 553 aaPredicted RBP14.3□□□□□ -0.12
PALB2-205ENST00000567003 TEDDM1Q5T9Z0 273 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 RIPPLY2Q5TAB7 128 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 RNASEH2BQ5TBB1 312 aaKnown RBP14.3□□□□□ -0.12
PALB2-205ENST00000567003 CCDC137Q6PK04 289 aaKnown RBP14.3□□□□□ -0.12
PALB2-205ENST00000567003 SLCO4C1Q6ZQN7 724 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 ZNF595Q8IYB9 648 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 NAXEQ8NCW5 288 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 WFDC11Q8NEX6 87 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 SLC2A12Q8TD20 617 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 SARAFQ96BY9 339 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 CERS2Q96G23 380 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 CFAP36Q96G28 342 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 EGFL8Q99944 293 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 ALOXE3Q9BYJ1 711 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 SLC6A15Q9H2J7 730 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 PPANQ9NQ55 473 aaKnown RBP14.3□□□□□ -0.12
PALB2-205ENST00000567003 METRNQ9UJH8 293 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 CBLCQ9ULV8 474 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 VWA7Q9Y334 891 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 KIAA1549Q9HCM3 1950 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 NINQ8N4C6 2090 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 FBN3Q75N90 2809 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 JMJD1CQ15652 2540 aa14.3□□□□□ -0.12
PALB2-205ENST00000567003 TRGV5A0A0B4J1U4 118 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 SUSD5O60279 629 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 ETHE1O95571 254 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 P04436 131 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 C1GALT1C1LP0DN25 315 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 TNNI3P19429 210 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 FLYWCH1Q4VC44 716 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 FBXO48Q5FWF7 155 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 SPANXN3Q5MJ09 141 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 PRAMEF20Q5VT98 475 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 FAM45BPQ6NSW5 357 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 TRMT10BQ6PF06 316 aaKnown RBP14.29□□□□□ -0.12
PALB2-205ENST00000567003 ADGRD1Q6QNK2 874 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 PAMR1Q6UXH9 720 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 TMIGD1Q6UXZ0 262 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 GAS2L3Q86XJ1 694 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 PPIL6Q8IXY8 311 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 GOLM1Q8NBJ4 401 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 MORN4Q8NDC4 146 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 OR14A16Q8NHC5 309 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 GOT1L1Q8NHS2 421 aaPredicted RBP14.29□□□□□ -0.12
PALB2-205ENST00000567003 FAM45AQ8TCE6 357 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 DOK4Q8TEW6 326 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 DAZLQ92904 295 aaKnown RBP14.29□□□□□ -0.12
PALB2-205ENST00000567003 ALPK1Q96QP1 1244 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 DAPP1Q9UN19 280 aa14.29□□□□□ -0.12
PALB2-205ENST00000567003 MRPS33Q9Y291 106 aaKnown RBP14.29□□□□□ -0.12
PALB2-205ENST00000567003 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.29□□□□□ -0.12
PALB2-205ENST00000567003 FN1P02751 2386 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms