RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 I6L893 689 aaPredicted RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 FOXE1O00358 373 aaPredicted RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 WNT9BO14905 357 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SPOPO43791 374 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 LRP5O75197 1615 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CLN5O75503 358 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SERPINI2O75830 405 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 ANP32DO95626 131 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 ESRRBO95718 433 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 HIST1H2AGP0C0S8 130 aaPredicted RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 GSTT2P0CG29 244 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 GSTT2BP0CG30 244 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 OR8G3PP0DMU2 310 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC2A3P11169 496 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF44P15621 663 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 TPSB2P20231 275 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CYP3A5P20815 502 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CD9P21926 228 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CHRNA7P36544 502 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 ACADSBP45954 432 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 AVPR1BP47901 424 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC6A8P48029 635 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 LBX1P52954 281 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CLDN17P56750 224 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SP3Q02447 781 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 KLC1Q07866 573 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 TRAP1Q12931 704 aaKnown RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM132DQ14C87 1099 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SYCP1Q15431 976 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SPHARQ15513 63 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 TPSAB1Q15661 275 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 DUSP6Q16828 381 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM35AQ53FP2 167 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 RAB6CQ53S08 254 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 FBXO48Q5FWF7 155 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 FNDC7Q5VTL7 733 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CARD17Q5XLA6 110 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CORO6Q6QEF8 472 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM64Q6YI46 380 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 Q6ZSV7 163 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 Q6ZTK2 550 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 MROH5Q6ZUA9 1318 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 PAQR9Q6ZVX9 377 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 TRMT1LQ7Z2T5 733 aaKnown RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CPEB2Q7Z5Q1 589 aaKnown RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CTU1Q7Z7A3 348 aaKnown RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 LHFPL4Q7Z7J7 247 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CDR2LQ86X02 465 aaPredicted RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 ECHDC2Q86YB7 292 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 VSTM4Q8IW00 320 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC43A2Q8N370 569 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 RNF149Q8NC42 400 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CCDC197Q8NCU1 140 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 C17orf47Q8NEP4 570 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 OR5D13Q8NGL4 314 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 OR6M1Q8NGM8 313 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 THAP6Q8TBB0 222 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 DPF1Q92782 380 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 RPL3LQ92901 407 aaKnown RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 HIST1H2ACQ93077 130 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 PIGTQ969N2 578 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 PINX1Q96BK5 328 aaKnown RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF274Q96GC6 653 aaPredicted RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM19Q96HH6 336 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 IGSF21Q96ID5 467 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 PDLIM2Q96JY6 352 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 PANX1Q96RD7 426 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 AGPAT1Q99943 283 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 MMTAG2Q9BU76 263 aaKnown RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 C1QTNF7Q9BXJ2 289 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC7A5P2Q9GIP4 190 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 RAB6CQ9H0N0 254 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SYNDIG1Q9H7V2 258 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 TLE6Q9H808 572 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 A4GALTQ9NPC4 353 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SEMA4GQ9NTN9 838 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 PLEK2Q9NYT0 353 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 SPATA7Q9P0W8 599 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 LCMT1Q9UIC8 334 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 CDH9Q9ULB4 789 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF490Q9ULM2 529 aaPredicted RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 STUB1Q9UNE7 303 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 MRPL11Q9Y3B7 192 aaKnown RBP3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 OR1A2Q9Y585 309 aa3.06□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF608Q9ULD9 1512 aaPredicted RBP3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 A0A087WUV0 522 aaPredicted RBP3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 A0A0G2JK05 382 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 WASH3PC4AMC7 463 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 DVL1O14640 695 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 CHEK1O14757 476 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 ARPC3O15145 178 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 MDM4O15151 490 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF264O43296 627 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 SDC3O75056 442 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 CTAG2O75638 210 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 PAPSS2O95340 614 aaPredicted RBP3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 EPOP01588 193 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 SERPINF2P08697 491 aa3.05□□□□□ -1.92
HERPUD1-211ENST00000566550 FGF2P09038 288 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms