RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 DNAJB8Q8NHS0 232 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 ZNF501Q96CX3 271 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 NPLQ9BXD5 320 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 MMADHCQ9H3L0 296 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 SERHLQ9NQF3 203 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 MS4A12Q9NXJ0 267 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 KCMF1Q9P0J7 381 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 SLAMF8Q9P0V8 285 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 PRPF19Q9UMS4 504 aaKnown RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 SPACA6W5XKT8 324 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 A0A0A6YYC8 382 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-213ENST00000565834 I3L1I5 382 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-213ENST00000565834 RNASET2O00584 256 aaKnown RBP17.73■□□□□ 0.43
COMMD4-213ENST00000565834 RDH16O75452 317 aa17.73■□□□□ 0.43
COMMD4-213ENST00000565834 TNFRSF17Q02223 184 aa17.73■□□□□ 0.43
COMMD4-213ENST00000565834 C8orf82Q6P1X6 216 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-213ENST00000565834 DLEU7Q6UYE1 221 aa17.73■□□□□ 0.43
COMMD4-213ENST00000565834 DNAJC14Q6Y2X3 702 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-213ENST00000565834 NATD1Q8N6N6 113 aa17.73■□□□□ 0.43
COMMD4-213ENST00000565834 UTP4Q969X6 686 aaKnown RBP17.73■□□□□ 0.43
COMMD4-213ENST00000565834 CIDECQ96AQ7 238 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-213ENST00000565834 EXOSC8Q96B26 276 aaKnown RBP17.73■□□□□ 0.43
COMMD4-213ENST00000565834 SCN2AQ99250 2005 aa17.73■□□□□ 0.43
COMMD4-213ENST00000565834 GPATCH1Q9BRR8 931 aaKnown RBP17.73■□□□□ 0.43
COMMD4-213ENST00000565834 SPAG4Q9NPE6 437 aa17.73■□□□□ 0.43
COMMD4-213ENST00000565834 CUTCQ9NTM9 273 aa17.73■□□□□ 0.43
COMMD4-213ENST00000565834 C5AR2Q9P296 337 aa17.73■□□□□ 0.43
COMMD4-213ENST00000565834 BTNL2Q9UIR0 455 aa17.73■□□□□ 0.43
COMMD4-213ENST00000565834 A0A096LPI6 279 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 RFXANKO14593 260 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 FOXS1O43638 330 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 GDF9O60383 454 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 ERN1O75460 977 aaKnown RBP17.72■□□□□ 0.43
COMMD4-213ENST00000565834 PRKRAO75569 313 aaKnown RBP17.72■□□□□ 0.43
COMMD4-213ENST00000565834 NSA2O95478 260 aaKnown RBP17.72■□□□□ 0.43
COMMD4-213ENST00000565834 EFNA1P20827 205 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-213ENST00000565834 TLX1P31314 330 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-213ENST00000565834 TRPC1P48995 793 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 CORO7P57737 925 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 PRSS53Q2L4Q9 553 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 CLECL1Q8IZS7 167 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 OR5T3Q8NGG3 340 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 MIEF2Q96C03 454 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 CCDC115Q96NT0 180 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 PANX1Q96RD7 426 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 CDRT15Q96T59 188 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 INPP5KQ9BT40 448 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 TAS2R7Q9NYW3 318 aa17.72■□□□□ 0.43
COMMD4-213ENST00000565834 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.72■□□□□ 0.43
COMMD4-213ENST00000565834 GLOD5A6NK44 160 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 PDPK1O15530 556 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 DNAJB6O75190 326 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 ANP32DO95626 131 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 CPSF4O95639 269 aaKnown RBP17.71■□□□□ 0.43
COMMD4-213ENST00000565834 CSTF2P33240 577 aaKnown RBP eCLIP17.71■□□□□ 0.43
COMMD4-213ENST00000565834 AVPR1BP47901 424 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 ZFP36L1Q07352 338 aaKnown RBP17.71■□□□□ 0.43
COMMD4-213ENST00000565834 ILKQ13418 452 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 MPEG1Q2M385 716 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 CCDC157Q569K6 752 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 LRIF1Q5T3J3 769 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 B3GNT8Q7Z7M8 397 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 ULK2Q8IYT8 1036 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 CA13Q8N1Q1 262 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 DTWD1Q8N5C7 304 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 DNAJB14Q8TBM8 379 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 UCN3Q969E3 161 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 CLPTM1LQ96KA5 538 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 CGREF1Q99674 301 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 NDC1Q9BTX1 674 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 PAIP1Q9H074 479 aaKnown RBP17.71■□□□□ 0.43
COMMD4-213ENST00000565834 ADA2Q9NZK5 511 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 UTS2RQ9UKP6 389 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 CLCA2Q9UQC9 943 aa17.71■□□□□ 0.43
COMMD4-213ENST00000565834 COL27A1Q8IZC6 1860 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-213ENST00000565834 C15orf38-AP3S2A0A0A6YYH1 394 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 AGRPO00253 132 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 PGRMC2O15173 223 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 RFPL3O75679 317 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 SLC6A2P23975 617 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 SLC7A2P52569 658 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 HNRNPFP52597 415 aaKnown RBP17.71■□□□□ 0.42
COMMD4-213ENST00000565834 E2F1Q01094 437 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 STPG1Q5TH74 334 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 YOD1Q5VVQ6 348 aaPredicted RBP17.71■□□□□ 0.42
COMMD4-213ENST00000565834 SLC48A1Q6P1K1 146 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 RBM44Q6ZP01 1051 aaKnown RBP17.71■□□□□ 0.42
COMMD4-213ENST00000565834 TTLL10Q6ZVT0 673 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 ARPINQ7Z6K5 226 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 SCUBE1Q8IWY4 988 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 KIAA2013Q8IYS2 634 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 MMABQ96EY8 250 aaPredicted RBP17.71■□□□□ 0.42
COMMD4-213ENST00000565834 OR6C1Q96RD1 312 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 CSF3RQ99062 836 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 CLK4Q9HAZ1 481 aaKnown RBP17.71■□□□□ 0.42
COMMD4-213ENST00000565834 SIDT1Q9NXL6 827 aaKnown RBP17.71■□□□□ 0.42
COMMD4-213ENST00000565834 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.71■□□□□ 0.42
COMMD4-213ENST00000565834 PCDHGB4Q9UN71 923 aa17.71■□□□□ 0.42
COMMD4-213ENST00000565834 A0A1W2PRB8 838 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 CHST10O43529 356 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms