RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 TBX6O95947 436 aaPredicted RBP17.69■□□□□ 0.42
SPSB3-207ENST00000565550 SMIM10L1P0DMW3 83 aa17.69■□□□□ 0.42
SPSB3-207ENST00000565550 MAOAP21397 527 aa17.69■□□□□ 0.42
SPSB3-207ENST00000565550 TPP2P29144 1249 aaPredicted RBP17.69■□□□□ 0.42
SPSB3-207ENST00000565550 MAPKAPK3Q16644 382 aa17.69■□□□□ 0.42
SPSB3-207ENST00000565550 QSOX2Q6ZRP7 698 aa17.69■□□□□ 0.42
SPSB3-207ENST00000565550 C4orf33Q8N1A6 199 aa17.69■□□□□ 0.42
SPSB3-207ENST00000565550 RNF175Q8N4F7 328 aa17.69■□□□□ 0.42
SPSB3-207ENST00000565550 FAM98AQ8NCA5 519 aaKnown RBP17.69■□□□□ 0.42
SPSB3-207ENST00000565550 ADAMTS18Q8TE60 1221 aa17.69■□□□□ 0.42
SPSB3-207ENST00000565550 SMIM10Q96HG1 83 aa17.69■□□□□ 0.42
SPSB3-207ENST00000565550 MRPL57Q9BQC6 102 aaKnown RBP17.69■□□□□ 0.42
SPSB3-207ENST00000565550 SLC6A16Q9GZN6 736 aa17.69■□□□□ 0.42
SPSB3-207ENST00000565550 MRPL46Q9H2W6 279 aaKnown RBP17.69■□□□□ 0.42
SPSB3-207ENST00000565550 RHBGQ9H310 441 aa17.69■□□□□ 0.42
SPSB3-207ENST00000565550 LRBAP50851 2863 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 A0A0G2JN53 185 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 URADA6NGE7 173 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 ZNHIT1O43257 154 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 ASNA1O43681 348 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 SNRPB2P08579 225 aaKnown RBP17.68■□□□□ 0.42
SPSB3-207ENST00000565550 TSPAN8P19075 237 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 IRF8Q02556 426 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 GTF2H2Q13888 395 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 PCBP2Q15366 365 aaKnown RBP eCLIP17.68■□□□□ 0.42
SPSB3-207ENST00000565550 TOR1AIP1Q5JTV8 583 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 GTF2H2CQ6P1K8 395 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 TMIGD1Q6UXZ0 262 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 Q6ZPB1 254 aaPredicted RBP17.68■□□□□ 0.42
SPSB3-207ENST00000565550 SIAH3Q8IW03 269 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 MREGQ8N565 214 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 TRPV3Q8NET8 790 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 CCT6BQ92526 530 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 WDR34Q96EX3 536 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 PTCD3Q96EY7 689 aaKnown RBP17.68■□□□□ 0.42
SPSB3-207ENST00000565550 CDK15Q96Q40 435 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 CLK4Q9HAZ1 481 aaKnown RBP17.68■□□□□ 0.42
SPSB3-207ENST00000565550 NECTIN3Q9NQS3 549 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 ANGPTL3Q9Y5C1 460 aa17.68■□□□□ 0.42
SPSB3-207ENST00000565550 ABCA12Q86UK0 2595 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 A0A1B0GTL3 188 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 CCDC189A1A4V9 331 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 SAGE2PA6NJ88 616 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 A8MUA0 341 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 PSMD12O00232 456 aaPredicted RBP17.67■□□□□ 0.42
SPSB3-207ENST00000565550 PPP6CO00743 305 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 CDK2AP1O14519 115 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 OR7A17O14581 309 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 SMIM24O75264 130 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 CDH16O75309 829 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 H2AFYO75367 372 aaKnown RBP17.67■□□□□ 0.42
SPSB3-207ENST00000565550 SH3BGRLO75368 114 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 SLC25A12O75746 678 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 RNH1P13489 461 aaKnown RBP17.67■□□□□ 0.42
SPSB3-207ENST00000565550 EPB42P16452 691 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 HNRNPH1P31943 449 aaKnown RBP17.67■□□□□ 0.42
SPSB3-207ENST00000565550 CYB561P49447 251 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 SMSP52788 366 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 MLF1P58340 268 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 IFFO1Q0D2I5 559 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 ZNF227Q86WZ6 799 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 NFAM1Q8NET5 270 aaPredicted RBP17.67■□□□□ 0.42
SPSB3-207ENST00000565550 OR52B6Q8NGF0 335 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 ACMSDQ8TDX5 336 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 CAPS2Q9BXY5 557 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 ZBTB26Q9HCK0 441 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 PRDM9Q9NQV7 894 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 PCTPQ9UKL6 214 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 MEMO1Q9Y316 297 aa17.67■□□□□ 0.42
SPSB3-207ENST00000565550 IGKV3D-11A0A0A0MRZ8 115 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 TCRBV16S1A1N1A0A5B0 115 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 NME2P1O60361 137 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 DLX3O60479 287 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 SERPINA6P08185 405 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 COX6B1P14854 86 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 AGAP20933 346 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 NME2P22392 152 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 ELAVL4P26378 380 aaKnown RBP17.66■□□□□ 0.42
SPSB3-207ENST00000565550 PTGER4P35408 488 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 PIK3CGP48736 1102 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 HSF1Q00613 529 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 CDSNQ15517 529 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 RNFT1Q5M7Z0 435 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 MYLK4Q86YV6 388 aaPredicted RBP17.66■□□□□ 0.42
SPSB3-207ENST00000565550 KRT78Q8N1N4 520 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 CA13Q8N1Q1 262 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 CPSF7Q8N684 471 aaKnown RBP17.66■□□□□ 0.42
SPSB3-207ENST00000565550 EHD1Q9H4M9 534 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 NOL11Q9H8H0 719 aaKnown RBP17.66■□□□□ 0.42
SPSB3-207ENST00000565550 TRIM45Q9H8W5 580 aaPredicted RBP17.66■□□□□ 0.42
SPSB3-207ENST00000565550 IPPKQ9H8X2 491 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 RNF11Q9Y3C5 154 aa17.66■□□□□ 0.42
SPSB3-207ENST00000565550 PCNX1Q96RV3 2341 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 CSMD1Q96PZ7 3565 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 STX16-NPEPL1H3BU86 382 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 STX16O14662 325 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 RPS17P08708 135 aaKnown RBP17.65■□□□□ 0.42
SPSB3-207ENST00000565550 PCNAP12004 261 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 CREB1P16220 341 aa17.65■□□□□ 0.42
SPSB3-207ENST00000565550 ABOP16442 354 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms