RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 PRRC2AP48634 2157 aaKnown RBP17.94■□□□□ 0.46
CDH11-203ENST00000562325 AKAP6Q13023 2319 aa17.94■□□□□ 0.46
CDH11-203ENST00000562325 GOLGA6L10A0A0M3HER8 536 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 PPP2R1BP30154 601 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 SLC6A12P48065 614 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 MAN2A2P49641 1150 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 LIM2P55344 173 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 DLX5P56178 289 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 SLC10A1Q14973 349 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 RTL6Q6ICC9 239 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 ZNF585AQ6P3V2 769 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 DND1Q8IYX4 353 aaKnown RBP17.93■□□□□ 0.46
CDH11-203ENST00000562325 TMEM52Q8NDY8 209 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 PTPMT1Q8WUK0 201 aaPredicted RBP17.93■□□□□ 0.46
CDH11-203ENST00000562325 LRRC39Q96DD0 335 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 LRRC46Q96FV0 321 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 POLDIP3Q9BY77 421 aaKnown RBP17.93■□□□□ 0.46
CDH11-203ENST00000562325 QPCTLQ9NXS2 382 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 ACAD8Q9UKU7 415 aa17.93■□□□□ 0.46
CDH11-203ENST00000562325 ANKDD1BA6NHY2 528 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 WWP2O00308 870 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 NRDCO43847 1150 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 P04436 131 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 IFNA16P05015 189 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 HOXB4P17483 251 aaPredicted RBP17.92■□□□□ 0.46
CDH11-203ENST00000562325 KLK2P20151 261 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 MAGEA5P43359 124 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 HNRNPFP52597 415 aaKnown RBP17.92■□□□□ 0.46
CDH11-203ENST00000562325 RNF4P78317 190 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 BIKQ13323 160 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 SLBPQ14493 270 aaKnown RBP eCLIP17.92■□□□□ 0.46
CDH11-203ENST00000562325 CDKL4Q5MAI5 379 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 C1orf185Q5T7R7 199 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 ABHD17CQ6PCB6 329 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 FAM47EQ6ZV65 393 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 CAMKMTQ7Z624 323 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 FAM47BQ8NA70 645 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 SRFBP1Q8NEF9 429 aaKnown RBP17.92■□□□□ 0.46
CDH11-203ENST00000562325 NUBPLQ8TB37 319 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 MBD6Q96DN6 1003 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 EGFL8Q99944 293 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 PPANQ9NQ55 473 aaKnown RBP17.92■□□□□ 0.46
CDH11-203ENST00000562325 RASSF1Q9NS23 344 aa17.92■□□□□ 0.46
CDH11-203ENST00000562325 CCM2LQ9NUG4 571 aaPredicted RBP17.92■□□□□ 0.46
CDH11-203ENST00000562325 MAP1AP78559 2803 aaPredicted RBP17.91■□□□□ 0.46
CDH11-203ENST00000562325 A0A0G2JMM0 328 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 A0A1W2PPB8 328 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 A0A1W2PRS3 328 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 HSPB2A8KAH6 182 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 KIR3DP1A8MWS1 328 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 SYT5O00445 386 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 DNALI1O14645 258 aaPredicted RBP17.91■□□□□ 0.46
CDH11-203ENST00000562325 DIAPH2O60879 1101 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 WDR47O94967 919 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 KIR2DL3P43628 341 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 KCNC1P48547 511 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 NR0B1P51843 470 aaKnown RBP17.91■□□□□ 0.46
CDH11-203ENST00000562325 STX4Q12846 297 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 PPP1R7Q15435 360 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 HSPB2Q16082 182 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 FBXL19-AS1Q494R0 122 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 C16orf47Q6ZP98 133 aaPredicted RBP17.91■□□□□ 0.46
CDH11-203ENST00000562325 PDIK1LQ8N165 341 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 TCAIMQ8N3R3 496 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 FBXW8Q8N3Y1 598 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 SLC15A4Q8N697 577 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 ACTRT1Q8TDG2 376 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 SLCO2A1Q92959 643 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 RHBDF1Q96CC6 855 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 RMND5BQ96G75 393 aaPredicted RBP17.91■□□□□ 0.46
CDH11-203ENST00000562325 KCNC2Q96PR1 638 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 ALOXE3Q9BYJ1 711 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 CLEC4MQ9H2X3 399 aaPredicted RBP17.91■□□□□ 0.46
CDH11-203ENST00000562325 COPS7BQ9H9Q2 264 aaPredicted RBP17.91■□□□□ 0.46
CDH11-203ENST00000562325 PLAC1Q9HBJ0 212 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 POPDC3Q9HBV1 291 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 ZNF358Q9NW07 568 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 COPS7AQ9UBW8 275 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 FOXD3Q9UJU5 478 aaPredicted RBP17.91■□□□□ 0.46
CDH11-203ENST00000562325 IKZF3Q9UKT9 509 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 ATG4BQ9Y4P1 393 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 LIPGQ9Y5X9 500 aa17.91■□□□□ 0.46
CDH11-203ENST00000562325 TRGV5A0A0B4J1U4 118 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 CDC7O00311 574 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 TBX6O95947 436 aaPredicted RBP17.9■□□□□ 0.46
CDH11-203ENST00000562325 DNASE1P24855 282 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 GGT5P36269 586 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 ADH7P40394 386 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 PLA2G16P53816 162 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 ZNF750Q32MQ0 723 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 MSS51Q4VC12 460 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 STEAP4Q687X5 459 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 FRA10AC1Q70Z53 315 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 SLC2A12Q8TD20 617 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 FAM222BQ8WU58 562 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 CCT6BQ92526 530 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 WDR34Q96EX3 536 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 MS4A14Q96JA4 679 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 VPS39Q96JC1 886 aa17.9■□□□□ 0.46
CDH11-203ENST00000562325 OR8D2Q9GZM6 311 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms