RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 NRROSQ86YC3 692 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 CLEC4FQ8N1N0 589 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 TBC1D19Q8N5T2 526 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 FAM47BQ8NA70 645 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 OR5K1Q8NHB7 308 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 PNPT1Q8TCS8 783 aaKnown RBP16.93■□□□□ 0.3
SNX1-208ENST00000559844 CYGBQ8WWM9 190 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 RGMAQ96B86 450 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 XKR8Q9H6D3 395 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 PRDM8Q9NQV8 689 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 UCKL1Q9NWZ5 548 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 ICKQ9UPZ9 632 aa16.93■□□□□ 0.3
SNX1-208ENST00000559844 ARID1BQ8NFD5 2236 aaPredicted RBP16.92■□□□□ 0.3
SNX1-208ENST00000559844 FEZF1A0PJY2 475 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 OR52A4PA6NMU1 304 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 NDUFS4O43181 175 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 ZNF682O95780 498 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 TBX6O95947 436 aaPredicted RBP16.92■□□□□ 0.3
SNX1-208ENST00000559844 ALBP02768 609 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 EPHA8P29322 1005 aaPredicted RBP16.92■□□□□ 0.3
SNX1-208ENST00000559844 PCGF2P35227 344 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 BSGP35613 385 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 GRK3P35626 688 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 MAGEA2P43356 314 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 HBA1P69905 142 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 HEPACAMQ14CZ8 416 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 OTUD3Q5T2D3 398 aaPredicted RBP16.92■□□□□ 0.3
SNX1-208ENST00000559844 ABRAXAS1Q6UWZ7 409 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 CBLL1Q75N03 491 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 EIF3MQ7L2H7 374 aaKnown RBP16.92■□□□□ 0.3
SNX1-208ENST00000559844 ADCK2Q7Z695 626 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 OR52N2Q8NGI0 321 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 TBC1D20Q96BZ9 403 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 RMND5BQ96G75 393 aaPredicted RBP16.92■□□□□ 0.3
SNX1-208ENST00000559844 F2RL3Q96RI0 385 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 ASPSCR1Q9BZE9 553 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 MRPS30Q9NP92 439 aaKnown RBP16.92■□□□□ 0.3
SNX1-208ENST00000559844 TMEM184CQ9NVA4 438 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 TAS2R9Q9NYW1 312 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 USE1Q9NZ43 259 aa16.92■□□□□ 0.3
SNX1-208ENST00000559844 A0A1W2PRB8 838 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 H3BNH8 94 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 LRP3O75074 770 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 DDCP20711 480 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 FADDQ13158 208 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 APOFQ13790 326 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 CSRP2Q16527 193 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 TBPL2Q6SJ96 375 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 ZDHHC21Q8IVQ6 265 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 C11orf65Q8NCR3 313 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 SLC35A5Q9BS91 424 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 SORBS1Q9BX66 1292 aaKnown RBP16.91■□□□□ 0.3
SNX1-208ENST00000559844 ZNF717Q9BY31 904 aaPredicted RBP16.91■□□□□ 0.3
SNX1-208ENST00000559844 PARD6AQ9NPB6 346 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 FAF1Q9UNN5 650 aaPredicted RBP16.91■□□□□ 0.3
SNX1-208ENST00000559844 DOLKQ9UPQ8 538 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 GOLGA4Q13439 2230 aaKnown RBP16.91■□□□□ 0.3
SNX1-208ENST00000559844 SMIM31A0A1B0GVY4 71 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 PLOD2O00469 737 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 YKT6O15498 198 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 C1QCP02747 245 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 ALPLP05186 524 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 TRA2BP62995 288 aaKnown RBP16.91■□□□□ 0.3
SNX1-208ENST00000559844 RBBP4Q09028 425 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 TMEM35AQ53FP2 167 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 CYBRD1Q53TN4 286 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 GKN2Q86XP6 184 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 GATAD2AQ86YP4 633 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 HIPK1Q86Z02 1210 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 CIDECQ96AQ7 238 aaPredicted RBP16.91■□□□□ 0.3
SNX1-208ENST00000559844 ZNF764Q96H86 408 aaPredicted RBP16.91■□□□□ 0.3
SNX1-208ENST00000559844 RBM4BQ9BQ04 359 aaKnown RBP16.91■□□□□ 0.3
SNX1-208ENST00000559844 DPH2Q9BQC3 489 aaPredicted RBP16.91■□□□□ 0.3
SNX1-208ENST00000559844 RBM4Q9BWF3 364 aaKnown RBP16.91■□□□□ 0.3
SNX1-208ENST00000559844 EPB41L1Q9H4G0 881 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 TAAR2Q9P1P5 351 aa16.91■□□□□ 0.3
SNX1-208ENST00000559844 PRICKLE3O43900 615 aaPredicted RBP16.9■□□□□ 0.3
SNX1-208ENST00000559844 KRT75O95678 551 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 NTRK1P04629 796 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 PABPC4LP0CB38 370 aaKnown RBP16.9■□□□□ 0.3
SNX1-208ENST00000559844 THRBP10828 461 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 CMPK1P30085 196 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 SHMT2P34897 504 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 ADARB1P78563 741 aaKnown RBP16.9■□□□□ 0.3
SNX1-208ENST00000559844 MPEG1Q2M385 716 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 KCTD21Q4G0X4 260 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 FOXB2Q5VYV0 432 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 TRIM40Q6P9F5 258 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 PATL1Q86TB9 770 aaKnown RBP16.9■□□□□ 0.3
SNX1-208ENST00000559844 SLC25A45Q8N413 288 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 TSPAN14Q8NG11 270 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 TM4SF18Q96CE8 201 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 CLK4Q9HAZ1 481 aaKnown RBP16.9■□□□□ 0.3
SNX1-208ENST00000559844 IL1RAPQ9NPH3 570 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 ADPRHL2Q9NX46 363 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 IFT80Q9P2H3 777 aaPredicted RBP16.9■□□□□ 0.3
SNX1-208ENST00000559844 TBC1D29Q9UFV1 150 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 UTS2RQ9UKP6 389 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 BAG5Q9UL15 447 aa16.9■□□□□ 0.3
SNX1-208ENST00000559844 ZFHX2Q9C0A1 2572 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms