RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ZNF274Q96GC6 653 aaPredicted RBP2.61□□□□□ -1.99
SPG11-206ENST00000558093 SERAC1Q96JX3 654 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 RUNDC3BQ96NL0 473 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 ALKBH3Q96Q83 286 aaPredicted RBP2.61□□□□□ -1.99
SPG11-206ENST00000558093 PAIP2Q9BPZ3 127 aaKnown RBP2.61□□□□□ -1.99
SPG11-206ENST00000558093 MRPL9Q9BYD2 267 aaKnown RBP2.61□□□□□ -1.99
SPG11-206ENST00000558093 FNDC4Q9H6D8 234 aaPredicted RBP2.61□□□□□ -1.99
SPG11-206ENST00000558093 S100A14Q9HCY8 104 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 COMMD8Q9NX08 183 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 GIMAP2Q9UG22 337 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 VSIG4Q9Y279 399 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 POMT1Q9Y6A1 747 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 RALGAPA1Q6GYQ0 2036 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 ADAMTS9Q9P2N4 1935 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 PRRC2AP48634 2157 aaKnown RBP2.6□□□□□ -1.99
SPG11-206ENST00000558093 LOC390937A0A1W2PQ73 354 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 IGLON5A6NGN9 336 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 C5orf52A6NGY3 159 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 RPL37AP8A6NKH3 93 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 TMEM110-MUSTN1A8MSY1 372 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 KBTBD13C9JR72 458 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 H7C0S8 307 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 FBP2O00757 339 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 RENP00797 406 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 LYNP07948 512 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 MUTP22033 750 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 SRD5A2P31213 254 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 SPRP35270 261 aaPredicted RBP2.6□□□□□ -1.99
SPG11-206ENST00000558093 GP5P40197 560 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 ELK3P41970 407 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 CD151P48509 253 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 RPL34P49207 117 aaKnown RBP2.6□□□□□ -1.99
SPG11-206ENST00000558093 BACE1P56817 501 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 SCN1BQ07699 218 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 CEACAM7Q14002 265 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 FASTKQ14296 549 aaKnown RBP2.6□□□□□ -1.99
SPG11-206ENST00000558093 C3AR1Q16581 482 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 POM121L1PQ3SYA9 428 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 ZNF506Q5JVG8 444 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 ZNF770Q6IQ21 691 aaPredicted RBP2.6□□□□□ -1.99
SPG11-206ENST00000558093 CAVIN1Q6NZI2 390 aaKnown RBP2.6□□□□□ -1.99
SPG11-206ENST00000558093 SHQ1Q6PI26 577 aaKnown RBP2.6□□□□□ -1.99
SPG11-206ENST00000558093 TRAT1Q6PIZ9 186 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 BAIAP2L2Q6UXY1 529 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 SERINC5Q86VE9 423 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 ANKRD46Q86W74 232 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 TBC1D10CQ8IV04 446 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 IQCF2Q8IXL9 164 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 KLHL7Q8IXQ5 586 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 RNF149Q8NC42 400 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 OR1B1Q8NGR6 318 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 SEPT8Q92599 483 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 DESI2Q9BSY9 194 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 LSG1Q9H089 658 aaKnown RBP2.6□□□□□ -1.99
SPG11-206ENST00000558093 LIME1Q9H400 295 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 SUDS3Q9H7L9 328 aaPredicted RBP2.6□□□□□ -1.99
SPG11-206ENST00000558093 MED17Q9NVC6 651 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 THYN1Q9P016 225 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 ZNF581Q9P0T4 197 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 UBQLN2Q9UHD9 624 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 GTF3C4Q9UKN8 822 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 ITGA11Q9UKX5 1188 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 ZNF346Q9UL40 294 aaKnown RBP2.6□□□□□ -1.99
SPG11-206ENST00000558093 CPQQ9Y646 472 aa2.6□□□□□ -1.99
SPG11-206ENST00000558093 SPATA31D1Q6ZQQ2 1576 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 ILVBLA1L0T0 632 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 YDJCA8MPS7 323 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 ANHXE9PGG2 379 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 WDR46O15213 610 aaKnown RBP2.59□□□□□ -1.99
SPG11-206ENST00000558093 HTATSF1O43719 755 aaKnown RBP2.59□□□□□ -1.99
SPG11-206ENST00000558093 ACSL4O60488 711 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 SELENOFO60613 162 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 TBCAO75347 108 aaKnown RBP2.59□□□□□ -1.99
SPG11-206ENST00000558093 CLN5O75503 358 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 B3GALNT1O75752 331 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 FGF19O95750 216 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 CALCAP01258 141 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 ANPEPP15144 967 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 KLK2P20151 261 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 PRPHP41219 470 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 OR3A1P47881 315 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 SLC1A6P48664 564 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 TRPC1P48995 793 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 MECOMQ03112 1051 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 PSMD6Q15008 389 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 RNF212Q495C1 297 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 HSP90B2PQ58FF3 399 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 HECTD3Q5T447 861 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 LYPLAL1Q5VWZ2 237 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 IQCA1Q86XH1 822 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 HIPK1Q86Z02 1210 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 TDHQ8IZJ6 230 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 TMEM99Q8N816 258 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 NAT8LQ8N9F0 302 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 MSANTD4Q8NCY6 345 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 UBLCP1Q8WVY7 318 aaPredicted RBP2.59□□□□□ -1.99
SPG11-206ENST00000558093 PCNPQ8WW12 178 aaKnown RBP2.59□□□□□ -1.99
SPG11-206ENST00000558093 ITLN1Q8WWA0 313 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 DNASE1L2Q92874 299 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 ITFG2Q969R8 447 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms