RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 CCDC43Q96MW1 224 aaKnown RBP4.4□□□□□ -1.71
CHD8-207ENST00000554384 DUX3Q96PT4 197 aa4.4□□□□□ -1.71
CHD8-207ENST00000554384 RBM4Q9BWF3 364 aaKnown RBP4.4□□□□□ -1.71
CHD8-207ENST00000554384 PITPNM3Q9BZ71 974 aa4.4□□□□□ -1.71
CHD8-207ENST00000554384 AKIRIN1Q9H9L7 192 aaPredicted RBP4.4□□□□□ -1.71
CHD8-207ENST00000554384 C3orf14Q9HBI5 128 aa4.4□□□□□ -1.71
CHD8-207ENST00000554384 EXOC1Q9NV70 894 aa4.4□□□□□ -1.71
CHD8-207ENST00000554384 AKAP7Q9P0M2 348 aaPredicted RBP4.4□□□□□ -1.71
CHD8-207ENST00000554384 SELENOKQ9Y6D0 94 aa4.4□□□□□ -1.71
CHD8-207ENST00000554384 CSNK1G3Q9Y6M4 447 aa4.4□□□□□ -1.71
CHD8-207ENST00000554384 FYCO1Q9BQS8 1478 aa4.4□□□□□ -1.71
CHD8-207ENST00000554384 LRPPRCP42704 1394 aaKnown RBP4.4□□□□□ -1.71
CHD8-207ENST00000554384 DHX57Q6P158 1386 aaKnown RBP4.4□□□□□ -1.71
CHD8-207ENST00000554384 TECPR2O15040 1411 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 PLCH1Q4KWH8 1693 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 NALCNQ8IZF0 1738 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 SIGLEC5O15389 551 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 B4GAT1O43505 415 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 TLX2O43763 284 aaPredicted RBP4.39□□□□□ -1.71
CHD8-207ENST00000554384 IGLV1-44P01699 117 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 SKILP12757 684 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 OR3A3P47888 321 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 NPRL3Q12980 569 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 CEACAM7Q14002 265 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 PPA1Q15181 289 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 HLA-BQ31612 363 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 SPANXN4Q5MJ08 99 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 FIP1L1Q6UN15 594 aaKnown RBP4.39□□□□□ -1.71
CHD8-207ENST00000554384 ADAD2Q8NCV1 583 aaKnown RBP4.39□□□□□ -1.71
CHD8-207ENST00000554384 C11orf45Q8TAV5 145 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 GPR148Q8TDV2 347 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 GGHQ92820 318 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 CASP10Q92851 521 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 C5orf30Q96GV9 206 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 IL12RB2Q99665 862 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 SYT15Q9BQS2 421 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 PILRAQ9UKJ1 303 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 KCNK6Q9Y257 313 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 ETV7Q9Y603 341 aa4.39□□□□□ -1.71
CHD8-207ENST00000554384 THSD7AQ9UPZ6 1657 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 XRN1Q8IZH2 1706 aaKnown RBP4.38□□□□□ -1.71
CHD8-207ENST00000554384 ANHXE9PGG2 379 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 LMO7DNF2Z398 122 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 G3V2L1 256 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 SLC1A7O00341 560 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 EDIL3O43854 480 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 GRAP2O75791 330 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 NXPH2O95156 264 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 OLFM2O95897 454 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 CPA3P15088 417 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 PRKACGP22612 351 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 CTNNA2P26232 953 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 SLC1A3P43003 542 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 CLCN4P51793 760 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 TEFQ10587 303 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 CNTN1Q12860 1018 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 PLBD1Q6P4A8 553 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 ALKBH5Q6P6C2 394 aaKnown RBP4.38□□□□□ -1.71
CHD8-207ENST00000554384 C15orf52Q6ZUT6 534 aaKnown RBP4.38□□□□□ -1.71
CHD8-207ENST00000554384 CHMP1BQ7LBR1 199 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 DND1Q8IYX4 353 aaKnown RBP4.38□□□□□ -1.71
CHD8-207ENST00000554384 SLC43A2Q8N370 569 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 ZNF519Q8TB69 540 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 PRAM1Q96QH2 718 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 ZNF300Q96RE9 604 aaPredicted RBP4.38□□□□□ -1.71
CHD8-207ENST00000554384 DDX50Q9BQ39 737 aaKnown RBP4.38□□□□□ -1.71
CHD8-207ENST00000554384 NTMT1Q9BV86 223 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 ZNF665Q9H7R5 613 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 DBF4Q9UBU7 674 aaPredicted RBP4.38□□□□□ -1.71
CHD8-207ENST00000554384 FETUBQ9UGM5 382 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 EXOC6BQ9Y2D4 811 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 SH3GLB1Q9Y371 365 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 WDR90Q96KV7 1748 aa4.38□□□□□ -1.71
CHD8-207ENST00000554384 GTPBP10A4D1E9 387 aaKnown RBP4.37□□□□□ -1.71
CHD8-207ENST00000554384 SLCO1B7G3V0H7 640 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 CACNB4O00305 520 aaPredicted RBP4.37□□□□□ -1.71
CHD8-207ENST00000554384 PSMD3O43242 534 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 GMNNO75496 209 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 STBD1O95210 358 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 OR1D2P34982 312 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 FEN1P39748 380 aaKnown RBP4.37□□□□□ -1.71
CHD8-207ENST00000554384 EVCP57679 992 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 SLC3A1Q07837 685 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 GPR50Q13585 617 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 GK2Q14410 553 aaPredicted RBP4.37□□□□□ -1.71
CHD8-207ENST00000554384 GRB14Q14449 540 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 FUT11Q495W5 492 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 LYPLAL1Q5VWZ2 237 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 TCEAL6Q6IPX3 200 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 TMEM64Q6YI46 380 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 Q71RC1 249 aaPredicted RBP4.37□□□□□ -1.71
CHD8-207ENST00000554384 ARL10Q8N8L6 244 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 OR13C5Q8NGS8 318 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 RPLP0P6Q8NHW5 317 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 SPATA18Q8TC71 538 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 PCDHB18PQ96TA0 734 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 UBAC1Q9BSL1 405 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 BARHL1Q9BZE3 327 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 HOXD1Q9GZZ0 328 aa4.37□□□□□ -1.71
CHD8-207ENST00000554384 DBNDD1Q9H9R9 158 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms