RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PTCHD1Q96NR3 888 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 AGAP4Q96P64 663 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 SMC6Q96SB8 1091 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 LPAR4Q99677 370 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 TUBB6Q9BUF5 446 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 LHPPQ9H008 270 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 SYNPO2LQ9H987 977 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF160Q9HCG1 818 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 SEMA4BQ9NPR2 832 aaPredicted RBP7.86□□□□□ -1.15
PSEN1-209ENST00000553855 AHSPQ9NZD4 102 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 TMEM216Q9P0N5 145 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 C5AR2Q9P296 337 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 TEKT2Q9UIF3 430 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 ANAPC2Q9UJX6 822 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 SNX6Q9UNH7 406 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 TP53TG5Q9Y2B4 290 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 WDFY3Q8IZQ1 3526 aa7.86□□□□□ -1.15
PSEN1-209ENST00000553855 DSPP15924 2871 aaKnown RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 PCM1Q15154 2024 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ARHGAP10A1A4S6 786 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 BLACEA4D250 179 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 MAGEB17A8MXT2 336 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 H0YIV9 168 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 H3BQF6 201 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 E2F3O00716 465 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 SOCS6O14544 535 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 DYRK3O43781 588 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 JRKO75564 520 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 CDC123O75794 336 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 KRT6AP02538 564 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 KRT6BP04259 564 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 PRB1P04280 392 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 EPXP11678 715 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 IMPDH1P20839 514 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 HMOX2P30519 316 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 HNRNPH1P31943 449 aaKnown RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 CRHR1P34998 444 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 TSFMP43897 325 aaKnown RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 KRT6CP48668 564 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 RAB38P57729 211 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 FOXL2P58012 376 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 OR4D2P58180 307 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 TAS2R50P59544 299 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 HERVK_113P63132 956 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 OLR1P78380 273 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 SLC13A2Q13183 592 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 RAPSNQ13702 412 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ABRAXAS2Q15018 415 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ZRSR2Q15696 482 aaKnown RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 EXT1Q16394 746 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ADPRMQ3LIE5 342 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 KHDRBS2Q5VWX1 349 aaKnown RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ABHD17CQ6PCB6 329 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 CYP20A1Q6UW02 462 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 PCSK4Q6UW60 755 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ATG14Q6ZNE5 492 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 PAGE2Q7Z2X7 111 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 PTRH1Q86Y79 214 aaKnown RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 PDSS2Q86YH6 399 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 C4orf33Q8N1A6 199 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 SVOPQ8N4V2 548 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 CCNYL1Q8N7R7 359 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 L3MBTL4Q8NA19 623 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 PLPP5Q8NEB5 264 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 FDCSPQ8NFU4 85 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 OR11G2Q8NGC1 345 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 OR5T3Q8NGG3 340 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 HUS1BQ8NHY5 278 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF473Q8WTR7 871 aaKnown RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 C8orf44Q96CB5 159 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 THOC3Q96J01 351 aaKnown RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 QRFPRQ96P65 431 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 F2RL3Q96RI0 385 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 MTERF1Q99551 399 aaKnown RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 SERPINI1Q99574 410 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 NTMT1Q9BV86 223 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ERVK-6Q9BXR3 956 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 MS4A8Q9BY19 250 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 VN1R1Q9GZP7 353 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 STMN4Q9H169 189 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 EPB41L4BQ9H329 900 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 KLHL31Q9H511 634 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 WDR41Q9HAD4 459 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 SLAMF7Q9NQ25 335 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 MS4A12Q9NXJ0 267 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 SENP1Q9P0U3 644 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ABI3Q9P2A4 366 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 PCTPQ9UKL6 214 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ZNF490Q9ULM2 529 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-209ENST00000553855 PLAAQ9Y263 795 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 MMACHCQ9Y4U1 282 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ASB1Q9Y576 335 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 CORINQ9Y5Q5 1042 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 ZFYVE26Q68DK2 2539 aa7.85□□□□□ -1.15
PSEN1-209ENST00000553855 IGHV1-45A0A0A0MS14 117 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 A0A0G2JN53 185 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 A0A1W2PPM1 405 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 LRRC14BA6NHZ5 514 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 GOLGA6L10A6NI86 522 aa7.84□□□□□ -1.15
PSEN1-209ENST00000553855 FOXE1O00358 373 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms