RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 CCDC81Q6ZN84 652 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 VN1R4Q7Z5H5 301 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 CHERPQ8IWX8 916 aaKnown RBP9.45□□□□□ -0.9
LETMD1-234ENST00000552645 FBXW8Q8N3Y1 598 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 ANKRD53Q8N9V6 530 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 KCT2Q8NC54 265 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.45□□□□□ -0.9
LETMD1-234ENST00000552645 COL26A1Q96A83 441 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 THAP11Q96EK4 314 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 C10orf90Q96M02 699 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 ZNF285Q96NJ3 590 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 FAM111AQ96PZ2 611 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 CDK15Q96Q40 435 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 ERVK-6Q9BXR3 956 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 CPNE5Q9HCH3 593 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 SELENONQ9NZV5 590 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 IFT80Q9P2H3 777 aaPredicted RBP9.45□□□□□ -0.9
LETMD1-234ENST00000552645 RIMS3Q9UJD0 308 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 PCTPQ9UKL6 214 aa9.45□□□□□ -0.9
LETMD1-234ENST00000552645 MRPS18BQ9Y676 258 aaKnown RBP9.45□□□□□ -0.9
LETMD1-234ENST00000552645 KCNE1BA0A087WTH5 132 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 A0A087WV48 116 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 A0A0A6YYC8 382 aaPredicted RBP9.44□□□□□ -0.9
LETMD1-234ENST00000552645 FITM1A5D6W6 292 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 ANKDD1BA6NHY2 528 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 I3L1I5 382 aaPredicted RBP9.44□□□□□ -0.9
LETMD1-234ENST00000552645 FFAR3O14843 346 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 GPR42O15529 346 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 PLIN3O60664 434 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 SH3BGRLO75368 114 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 PRKAR1AP10644 381 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 IL1RNP18510 177 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 CD22P20273 847 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 F8A1P23610 371 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 RPS18P62269 152 aaKnown RBP9.44□□□□□ -0.9
LETMD1-234ENST00000552645 RPS15P62841 145 aaKnown RBP9.44□□□□□ -0.9
LETMD1-234ENST00000552645 CXADRP78310 365 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 NFKB2Q00653 900 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 RGS1Q08116 209 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 BST1Q10588 318 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 STX3Q13277 289 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 LAPTM5Q13571 262 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 DNASE1L3Q13609 305 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 CPSF6Q16630 551 aaKnown RBP eCLIP9.44□□□□□ -0.9
LETMD1-234ENST00000552645 NDUFA9Q16795 377 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 NKAIN1Q4KMZ8 207 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 ARHGAP40Q5TG30 622 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 FAM69BQ5VUD6 431 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 ADNP2Q6IQ32 1131 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 ZYG11AQ6WRX3 759 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 SLC22A9Q8IVM8 553 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 TRPV3Q8NET8 790 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 TSPAN14Q8NG11 270 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 OR52B6Q8NGF0 335 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 ZNF420Q8TAQ5 688 aaPredicted RBP9.44□□□□□ -0.9
LETMD1-234ENST00000552645 PROKR1Q8TCW9 393 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 MMABQ96EY8 250 aaPredicted RBP9.44□□□□□ -0.9
LETMD1-234ENST00000552645 LRFN5Q96NI6 719 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 GPATCH1Q9BRR8 931 aaKnown RBP9.44□□□□□ -0.9
LETMD1-234ENST00000552645 EFCAB11Q9BUY7 163 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 DRC3Q9H069 523 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 EHD1Q9H4M9 534 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 IL17BQ9UHF5 180 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 MRPS2Q9Y399 296 aaKnown RBP9.44□□□□□ -0.9
LETMD1-234ENST00000552645 TSC22D4Q9Y3Q8 395 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 PKD1L2Q7Z442 2459 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 PTPRQQ9UMZ3 2332 aa9.44□□□□□ -0.9
LETMD1-234ENST00000552645 TRIM64BA6NI03 449 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 G3V2L1 256 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 OR7A17O14581 309 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 INHBBP09529 407 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 WT1P19544 449 aaPredicted RBP9.43□□□□□ -0.9
LETMD1-234ENST00000552645 FBLP22087 321 aaKnown RBP9.43□□□□□ -0.9
LETMD1-234ENST00000552645 TTKP33981 857 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 AHRP35869 848 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 PRKAA2P54646 552 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 AQP5P55064 265 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 TMPRSS3P57727 454 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 FOXL2P58012 376 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 ARPC4P59998 168 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 RAB8AP61006 207 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 SNRPNP63162 240 aaKnown RBP9.43□□□□□ -0.9
LETMD1-234ENST00000552645 SLC25A3Q00325 362 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 TOR1AIP1Q5JTV8 583 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 ZNF678Q5SXM1 525 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 MFSD4BQ5TF39 518 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 YOD1Q5VVQ6 348 aaPredicted RBP9.43□□□□□ -0.9
LETMD1-234ENST00000552645 MED27Q6P2C8 311 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 SHISA6Q6ZSJ9 500 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 PRSS41Q7RTY9 318 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 GPR180Q86V85 440 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 PRSS58Q8IYP2 241 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 CENPSQ8N2Z9 138 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 POU5F2Q8N7G0 328 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 ZSCAN1Q8NBB4 408 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 OR9A4Q8NGU2 314 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 CMTM5Q96DZ9 223 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 CCDC126Q96EE4 140 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 CRELD1Q96HD1 420 aa9.43□□□□□ -0.9
LETMD1-234ENST00000552645 CNBD2Q96M20 576 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms