RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 GCNT6Q5T4J0 391 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 ANXA8L1Q5VT79 327 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 TXNDC8Q6A555 127 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 GRHL2Q6ISB3 625 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 ARMCX6Q7L4S7 300 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 GALNT12Q8IXK2 581 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 UBE2J2Q8N2K1 259 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 CELF5Q8N6W0 485 aaKnown RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 ARL14EPQ8N8R7 260 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 ASCC1Q8N9N2 400 aaKnown RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 ZNF784Q8NCA9 323 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 HJURPQ8NCD3 748 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 DBF4BQ8NFT6 615 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 OR2AP1Q8NGE2 309 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 WDR48Q8TAF3 677 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 MYLIPQ8WY64 445 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 ASIC4Q96FT7 647 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 VPS35Q96QK1 796 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 PHOX2BQ99453 314 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 PKP4Q99569 1192 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 PIP5K1AQ99755 562 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 TMEM246Q9BRR3 403 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 ZNF556Q9HAH1 456 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 ZNF334Q9HCZ1 680 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 RANGRFQ9HD47 186 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 FZD3Q9NPG1 666 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 DYRK4Q9NR20 520 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 PAQR5Q9NXK6 330 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 STOX2Q9P2F5 926 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 B4GALT6Q9UBX8 382 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 REV1Q9UBZ9 1251 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 ZNF282Q9UDV7 671 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 NUFIP1Q9UHK0 495 aaKnown RBP5.18□□□□□ -1.58
LIMA1-212ENST00000552491 MAPRE3Q9UPY8 281 aa5.18□□□□□ -1.58
LIMA1-212ENST00000552491 DSPPQ9NZW4 1301 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 GOLGA4Q13439 2230 aaKnown RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 OBSL1O75147 1896 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 GNG14A0A1W2PPG7 69 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 TRBC2A0A5B9 178 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 MGAT4DA6NG13 374 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 TBKBP1A7MCY6 615 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 CENPXA8MT69 81 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 RNASET2O00584 256 aaKnown RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 NPC1O15118 1278 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 MPZL2O60487 215 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 GADD45GO95257 159 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 SLC16A8O95907 504 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 CSF2P04141 144 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 MSL3P1P0C860 447 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 ELNP15502 786 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 ITGA2P17301 1181 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 POLR2EP19388 210 aaKnown RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 CYP2A7P20853 494 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 IMPA1P29218 277 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 SERPINA4P29622 427 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 SSTR4P31391 388 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 TIA1P31483 386 aaKnown RBP eCLIP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 MAPK8P45983 427 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 ASMTP46597 345 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 PREPP48147 710 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 ALDH9A1P49189 494 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 SPINT3P49223 89 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 TUFMP49411 452 aaKnown RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 AP1S2P56377 157 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 MRPS15P82914 257 aaKnown RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 CDK6Q00534 326 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 LRRC74AQ0VAA2 488 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 UAP1L1Q3KQV9 507 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 GLYR1Q49A26 553 aaPredicted RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 RPS26P11Q5JNZ5 115 aaPredicted RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 RETSATQ6NUM9 610 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 AGTRAPQ6RW13 159 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 LYPD8Q6UX82 237 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 TMPRSS11AQ6ZMR5 421 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 GDPGP1Q6ZNW5 385 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 CCDC149Q6ZUS6 474 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 GLCCI1Q86VQ1 547 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 LSRQ86X29 649 aaPredicted RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 KRT73Q86Y46 540 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 RBM45Q8IUH3 476 aaKnown RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 SLC44A2Q8IWA5 706 aaPredicted RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 OR52N2Q8NGI0 321 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 GOT1L1Q8NHS2 421 aaPredicted RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 APOBEC4Q8WW27 367 aaKnown RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 ECHDC3Q96DC8 303 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 C2orf49Q9BVC5 232 aaPredicted RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 BRD9Q9H8M2 597 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 ABCB9Q9NP78 766 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 TRPV5Q9NQA5 729 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 ENOPH1Q9UHY7 261 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 RAB23Q9ULC3 237 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 YARS2Q9Y2Z4 477 aaKnown RBP5.17□□□□□ -1.58
LIMA1-212ENST00000552491 SNX11Q9Y5W9 270 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 MAU2Q9Y6X3 613 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 DNAH14Q0VDD8 3507 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 SLC35F4A4IF30 521 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 HEPACAM2A8MVW5 462 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 ERVH48-1M5A8F1 160 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 TPST2O60704 377 aa5.17□□□□□ -1.58
LIMA1-212ENST00000552491 IGSF6O95976 241 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms