RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 SSR2P43308 183 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 PLA2G16P53816 162 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ARSFP54793 590 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 EMP3P54852 163 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 AQP5P55064 265 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 RPS18P62269 152 aaKnown RBP11.41□□□□□ -0.58
HDAC7-226ENST00000547259 RPL38P63173 70 aaKnown RBP11.41□□□□□ -0.58
HDAC7-226ENST00000547259 MUM1Q2TAK8 710 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 FAM214AQ32MH5 1076 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ADPRMQ3LIE5 342 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 GALNTL6Q49A17 601 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 NADK2Q4G0N4 442 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ATP6AP1LQ52LC2 224 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 VWA5B1Q5TIE3 1220 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 YOD1Q5VVQ6 348 aaPredicted RBP11.41□□□□□ -0.58
HDAC7-226ENST00000547259 GARNL3Q5VVW2 1013 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 JMJD6Q6NYC1 403 aaPredicted RBP11.41□□□□□ -0.58
HDAC7-226ENST00000547259 TTLL10Q6ZVT0 673 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 MAVSQ7Z434 540 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 CPLX4Q7Z7G2 160 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 RFWD2Q8NHY2 731 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ADAMTS17Q8TE56 1095 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 UTP15Q8TED0 518 aaKnown RBP11.41□□□□□ -0.58
HDAC7-226ENST00000547259 RGMAQ96B86 450 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 RNF31Q96EP0 1072 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 C10orf90Q96M02 699 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 C3orf30Q96M34 536 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 FER1L6-AS2Q96M78 137 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 MRPL1Q9BYD6 325 aaKnown RBP11.41□□□□□ -0.58
HDAC7-226ENST00000547259 AICDAQ9GZX7 198 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ACTR5Q9H9F9 607 aaPredicted RBP11.41□□□□□ -0.58
HDAC7-226ENST00000547259 MEAF6Q9HAF1 191 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 LRTM1Q9HBL6 345 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ANKHQ9HCJ1 492 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 ENAMQ9NRM1 1142 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 TXLNGQ9NUQ3 528 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 AHSPQ9NZD4 102 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 DCTN4Q9UJW0 460 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 SCN3AQ9NY46 2000 aa11.41□□□□□ -0.58
HDAC7-226ENST00000547259 NUP210LQ5VU65 1888 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 CELSR2Q9HCU4 2923 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 A0A088AWK7 358 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 A0A0G2JND7 137 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 A0A1B0GX78 115 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 C4orf51C9J302 202 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 RTCAO00442 366 aaKnown RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 PLPP1O14494 284 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 SHOX2O60902 331 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 PEX11AO75192 247 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 SEC22BO75396 215 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 MYO1DO94832 1006 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 ALOX15P16050 662 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 ALOX12P18054 663 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 IL1RNP18510 177 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 ZNF10P21506 573 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 PRPH2P23942 346 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 AVPR1BP47901 424 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 UQCRFS1P47985 274 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 SKP1P63208 163 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 BTN3A2P78410 334 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 ACSM2AQ08AH3 577 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 SF3A3Q12874 501 aaKnown RBP eCLIP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 IL10RAQ13651 578 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 HERC3Q15034 1050 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 AP5B1Q2VPB7 878 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 DEFB134Q4QY38 66 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 SLC9B1Q4ZJI4 515 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 SPIN4Q56A73 249 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 PRAMEF17Q5VTA0 474 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 ACSM2BQ68CK6 577 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 NXNQ6DKJ4 435 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 CGB2Q6NT52 195 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 ABHD17CQ6PCB6 329 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 Q6ZSR9 355 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 ACAD11Q709F0 780 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 NUDT13Q86X67 352 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 METTL4Q8N3J2 472 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 METTL27Q8N6F8 245 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 C1orf52Q8N6N3 182 aaKnown RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 ENDOVQ8N8Q3 282 aaKnown RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 TM9SF4Q92544 642 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 APIPQ96GX9 242 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 PPP3R2Q96LZ3 170 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 KCNC2Q96PR1 638 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 SMAD5Q99717 465 aaKnown RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 TBCDQ9BTW9 1192 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 SORBS1Q9BX66 1292 aaKnown RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 ROGDIQ9GZN7 287 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 WDR55Q9H6Y2 383 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 AKIRIN1Q9H9L7 192 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 C1orf109Q9NX04 203 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 MAP10Q9P2G4 905 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 DHCR7Q9UBM7 475 aaKnown RBP11.4□□□□□ -0.58
HDAC7-226ENST00000547259 GIMAP2Q9UG22 337 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 NAALAD2Q9Y3Q0 740 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 CCL27Q9Y4X3 112 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 SLC22A7Q9Y694 548 aa11.4□□□□□ -0.58
HDAC7-226ENST00000547259 A0A0A6YYC8 382 aaPredicted RBP11.39□□□□□ -0.59
HDAC7-226ENST00000547259 ARHGAP10A1A4S6 786 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 ZNF860A6NHJ4 632 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms