RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 CD1DP15813 335 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 CPEP16870 476 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 ALOX12P18054 663 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 GNAZP19086 355 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 SPRP35270 261 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 GGT5P36269 586 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 MAGEA4P43358 317 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 TSFMP43897 325 aaKnown RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 UQCRFS1P47985 274 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 AGTR2P50052 363 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 EFNA3P52797 238 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 GPR85P60893 370 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 RAB10P61026 200 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 MEF2AQ02078 507 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 CDC16Q13042 620 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 PCOLCEQ15113 449 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 KBTBD12Q3ZCT8 623 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 PLEKHN1Q494U1 663 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 MINDY4Q4G0A6 757 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 PRR30Q53SZ7 412 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 GRTP1Q5TC63 336 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 GALNT18Q6P9A2 607 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 CEP128Q6ZU80 1094 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 CCDC91Q7Z6B0 441 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 CUZD1Q86UP6 607 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 CCDC25Q86WR0 208 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 CTAGE3PQ8IX95 158 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 FAM26EQ8N5C1 309 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 PDPRQ8NCN5 879 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 TRPV3Q8NET8 790 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 TTLQ8NG68 377 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 BRIX1Q8TDN6 353 aaKnown RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 METTL21AQ8WXB1 218 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 UBXN10Q96LJ8 280 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 LMF1Q96S06 567 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 MACROD1Q9BQ69 325 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 TUBB6Q9BUF5 446 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 PITHD1Q9GZP4 211 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 SPNS1Q9H2V7 528 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 EHD1Q9H4M9 534 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 CAB39LQ9H9S4 337 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 CLK4Q9HAZ1 481 aaKnown RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 ZBTB20Q9HC78 741 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 ZDHHC18Q9NUE0 388 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 ERVK13-1Q9NX77 482 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 WWOXQ9NZC7 414 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 GPRC5BQ9NZH0 403 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 HCN3Q9P1Z3 774 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 COPG2Q9UBF2 871 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 COA3Q9Y2R0 106 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 MTO1Q9Y2Z2 717 aaKnown RBP7.23□□□□□ -1.25
SNHG1-223ENST00000545440 NAALAD2Q9Y3Q0 740 aa7.23□□□□□ -1.25
SNHG1-223ENST00000545440 USP9YO00507 2555 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-223ENST00000545440 MYO7BQ6PIF6 2116 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 TMEM82A0PJX8 343 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 CCDC189A1A4V9 331 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 ZNF860A6NHJ4 632 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 TCP11X1B4DZS4 312 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 JRKO75564 520 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 TUBB4AP04350 444 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 SERPINA6P08185 405 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 ZNF888P0CJ79 500 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-223ENST00000545440 SLC35E2BP0CK96 405 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 FUT4P22083 530 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 GNLYP22749 145 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 JAK1P23458 1154 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 HPDP32754 393 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-223ENST00000545440 CD96P40200 585 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 HK2P52789 917 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 GUCY2DQ02846 1103 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 ZNF169Q14929 603 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-223ENST00000545440 SLMAPQ14BN4 828 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 TRADDQ15628 312 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 INAQ16352 499 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 C21orf62-AS1Q17RA5 79 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 DEFB134Q4QY38 66 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 MFSD4BQ5TF39 518 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 PLAG1Q6DJT9 500 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 FAAH2Q6GMR7 532 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 SULT1C3Q6IMI6 304 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 LANCL3Q6ZV70 420 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 LRRC70Q7Z2Q7 622 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 CPEB2Q7Z5Q1 589 aaKnown RBP7.22□□□□□ -1.25
SNHG1-223ENST00000545440 TBC1D1Q86TI0 1168 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-223ENST00000545440 GPSM1Q86YR5 675 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.22□□□□□ -1.253e-7■■■■■ 36.2
SNHG1-223ENST00000545440 PPM1NQ8N819 430 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 ANKRD53Q8N9V6 530 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 UTP15Q8TED0 518 aaKnown RBP7.22□□□□□ -1.25
SNHG1-223ENST00000545440 CHAC2Q8WUX2 184 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 PSMF1Q92530 271 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 KIAA1191Q96A73 305 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 TBC1D20Q96BZ9 403 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 SNRNP40Q96DI7 357 aaKnown RBP7.22□□□□□ -1.25
SNHG1-223ENST00000545440 MOCOSQ96EN8 888 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 PEX11GQ96HA9 241 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 IMMP1LQ96LU5 166 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 BARD1Q99728 777 aaKnown RBP7.22□□□□□ -1.25
SNHG1-223ENST00000545440 TMEM79Q9BSE2 394 aa7.22□□□□□ -1.25
SNHG1-223ENST00000545440 LRRC1Q9BTT6 524 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms