RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 C1GALT1C1Q96EU7 318 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 CAMK1GQ96NX5 476 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 SHROOM3Q8TF72 1996 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 FAAHO00519 579 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ATE1O95260 518 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 SLC35G6P0C7Q6 338 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 HMGA1P17096 107 aaKnown RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 CRHBPP24387 322 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 CLCNKAP51800 687 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 MTAPQ13126 283 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 VEZF1Q14119 521 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 DHCR24Q15392 516 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ZNF404Q494X3 552 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 LAPTM4BQ86VI4 370 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ZSWIM9Q86XI8 627 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 SLITRK4Q8IW52 837 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 KLHDC8BQ8IXV7 354 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 PJA1Q8NG27 643 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 OR56A1Q8NGH5 318 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 NDNFQ8TB73 568 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 LCN9Q8WX39 176 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 SORCS1Q8WY21 1168 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 SLC9A6Q92581 669 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 MUL1Q969V5 352 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 MOAP1Q96BY2 351 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 SLC6A15Q9H2J7 730 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 PELI2Q9HAT8 420 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 AMBNQ9NP70 447 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 DMRT3Q9NQL9 472 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 NUP50Q9UKX7 468 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 INTS6Q9UL03 887 aaKnown RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 MAGED1Q9Y5V3 778 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 ZNF879B4DU55 563 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 C6P13671 934 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 PRG2P13727 222 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 RHCEP18577 417 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 MAGP20916 626 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 F8A1P23610 371 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 MPIP34949 423 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ZNF155Q12901 538 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 MAB21L1Q13394 359 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 EFR3AQ14156 821 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 MICAQ29983 383 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ZNF181Q2M3W8 571 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 PGBD2Q6P3X8 592 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 DLEU7Q6UYE1 221 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ZNF517Q6ZMY9 492 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 GALNT10Q86SR1 603 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 DCP2Q8IU60 420 aaKnown RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 SLC15A4Q8N697 577 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 NCSTNQ92542 709 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 CIDECQ96AQ7 238 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 METTL2AQ96IZ6 378 aaKnown RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 DMRTB1Q96MA1 342 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 ZNF583Q96ND8 569 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 IL1RAPQ9NPH3 570 aa5.55□□□□□ -1.52
VPS50-220ENST00000544910 PAK1IP1Q9NWT1 392 aaPredicted RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 MRPS7Q9Y2R9 242 aaKnown RBP5.55□□□□□ -1.52
VPS50-220ENST00000544910 PRAMEF33A0A0G2JMD5 474 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 A0A0G2JN53 185 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 I3L521 148 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 B4GALT3O60512 393 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 PRAMEF10O60809 474 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 OXSR1O95747 527 aaPredicted RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 TIMP2P16035 220 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 MRPL19P49406 292 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 PITPNAQ00169 270 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 KCNC4Q03721 635 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 MBTPS1Q14703 1052 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 UTS2BQ765I0 119 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 PAPD5Q8NDF8 572 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 TOR1AIP2Q8NFQ8 470 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 BCL7CQ8WUZ0 217 aaPredicted RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 MAL2Q969L2 176 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 YIPF4Q9BSR8 244 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 GTPBP2Q9BX10 602 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 MMP27Q9H306 513 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 SRMSQ9H3Y6 488 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ANKRA2Q9H9E1 313 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 SNTG1Q9NSN8 517 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 TRIP11Q15643 1979 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 MYO16Q9Y6X6 1858 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 FAM86C2PA6NEL3 165 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 FABP12A6NFH5 140 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 OR6C70A6NIJ9 312 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ERI3O43414 337 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 B4GAT1O43505 415 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 GPR37L1O60883 481 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 IFNGP01579 166 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 CTSEP14091 401 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 CSF2RAP15509 400 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 CTGFP29279 349 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 PRLHRP49683 370 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 SMSP52788 366 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ADARB1P78563 741 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 LRRC32Q14392 662 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 SUZ12Q15022 739 aaKnown RBP5.54□□□□□ -1.52
VPS50-220ENST00000544910 NDUFA9Q16795 377 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 SWI5Q1ZZU3 235 aa5.54□□□□□ -1.52
VPS50-220ENST00000544910 ZNF311Q5JNZ3 666 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms