RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 NUP214P35658 2090 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PRAMEF33A0A0G2JMD5 474 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 GNG14A0A1W2PPG7 69 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PIPSLA2A3N6 862 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 ZAR1LA6NP61 321 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PSMD11O00231 422 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PCDH17O14917 1159 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 TBX19O60806 448 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PRAMEF10O60809 474 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 MOSPD3O75425 235 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 LEFTY1O75610 366 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 SNX4O95219 450 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PTHP01270 115 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 IFNA14P01570 189 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 LRG1P02750 347 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 OPN1SWP03999 348 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 CTSLP07711 333 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 STSP08842 583 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 ADRA2AP08913 450 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PIPP12273 146 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 RHCEP18577 417 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PDHA2P29803 388 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 CCR2P41597 374 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PIK3CBP42338 1070 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 CRATP43155 626 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 RECQLP46063 649 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 RGS6P49758 472 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 EIF2B2P49770 351 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 EPHA5P54756 1037 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 CDH12P55289 794 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 TBPL1P62380 186 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 OLR1P78380 273 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 CDK6Q00534 326 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 SPIBQ01892 262 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF45Q02386 682 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 POU4F2Q12837 409 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 TMEM115Q12893 351 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 SLBPQ14493 270 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC5A12Q1EHB4 618 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF284Q2VY69 593 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF805Q5CZA5 627 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 TRIM40Q6P9F5 258 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 TMEM220Q6QAJ8 160 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 LIPIQ6XZB0 460 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 CCDC149Q6ZUS6 474 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 IKBIPQ70UQ0 350 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF367Q7RTV3 350 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 DSG4Q86SJ6 1040 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 TMPRSS11BQ86T26 416 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 AMER2Q8N7J2 671 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 GPR156Q8NFN8 814 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 OR4K1Q8NGD4 311 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 NFKBIDQ8NI38 313 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 WDR48Q8TAF3 677 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 IRF7Q92985 503 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 CIDECQ96AQ7 238 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PPCDCQ96CD2 204 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 TXNDC15Q96J42 360 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 LRIG1Q96JA1 1093 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 DHRS1Q96LJ7 313 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 COQ10AQ96MF6 247 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 MAPKAP1Q9BPZ7 522 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 WRAP53Q9BUR4 548 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 TAPBPLQ9BX59 468 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC25A19Q9HC21 320 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 QPCTLQ9NXS2 382 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 GPR83Q9NYM4 423 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 TAS2R9Q9NYW1 312 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 MARK1Q9P0L2 795 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 NDOR1Q9UHB4 597 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 ENOPH1Q9UHY7 261 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 ITGB1BP2Q9UKP3 347 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PNMA8BQ9ULN7 279 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 ICKQ9UPZ9 632 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 IFT52Q9Y366 437 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 ENPP4Q9Y6X5 453 aa4.96□□□□□ -1.62
ATPAF1-212ENST00000542495 PCM1Q15154 2024 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 ABHD14A-ACY1A0A1B0GW23 586 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 TRIM43BA6NCK2 446 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 EFCAB10A6NFE3 127 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 NEDD8-MDP1E9PL57 170 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 H3BM21 787 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 J3KTA2 159 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 CACNB4O00305 520 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 PLK4O00444 970 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF197O14709 1029 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 FFAR1O14842 300 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 HAT1O14929 419 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 MPZL2O60487 215 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 COQ9O75208 318 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 SH3BGRLO75368 114 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 FBXO24O75426 580 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 CCNB2O95067 398 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 KRT75O95678 551 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 PTTG1O95997 202 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 SOD1P00441 154 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 C8AP07357 584 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 TYRP14679 529 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 SYN1P17600 705 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms