RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 TLE6Q9H808 572 aa4.73□□□□□ -1.65
CIT-211ENST00000541841 HOMER3Q9NSC5 361 aa4.73□□□□□ -1.65
CIT-211ENST00000541841 AIPL1Q9NZN9 384 aa4.73□□□□□ -1.65
CIT-211ENST00000541841 ATP6V1HQ9UI12 483 aa4.73□□□□□ -1.65
CIT-211ENST00000541841 TMED5Q9Y3A6 229 aa4.73□□□□□ -1.65
CIT-211ENST00000541841 C2CD2Q9Y426 696 aa4.73□□□□□ -1.65
CIT-211ENST00000541841 ZNF518AQ6AHZ1 1483 aa4.73□□□□□ -1.65
CIT-211ENST00000541841 PDS5AQ29RF7 1337 aaKnown RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 DUOX2Q9NRD8 1548 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 SPHKAPQ2M3C7 1700 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 XKRY2A2RUG3 117 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 ANKRD61A6NGH8 418 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 C15orf62A8K5M9 175 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 ANKRD66B4E2M5 251 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 ARPC2O15144 300 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 TOM1O60784 492 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 KCNJ13O60928 360 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 CSDE1O75534 798 aaKnown RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 SURF6O75683 361 aaKnown RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 CA3P07451 260 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 ASNSP08243 561 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 RALAP11233 206 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 CSF2RAP15509 400 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 CCNCP24863 283 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 PTPN6P29350 595 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 PRDX2P32119 198 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 ADRA1AP35348 466 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 MTIF2P46199 727 aaKnown RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 AMTP48728 403 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 PDX1P52945 283 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 BRWD1-AS2P59051 145 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 SSTP61278 116 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 SEC61A1P61619 476 aaKnown RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 TNFRSF17Q02223 184 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 DHX34Q14147 1143 aaKnown RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 ZMYND11Q15326 602 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 STX1AQ16623 288 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 PDK4Q16654 411 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 ITPRIPL2Q3MIP1 535 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 ARHGEF16Q5VV41 709 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 TPGS2Q68CL5 300 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 ARHGAP17Q68EM7 881 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 OR4A47Q6IF82 309 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 PMF1Q6P1K2 205 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 ODF3L1Q8IXM7 274 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 CDK20Q8IZL9 346 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 LRRC17Q8N6Y2 441 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 NOA1Q8NC60 698 aaKnown RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 STKLD1Q8NE28 680 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 TRPV3Q8NET8 790 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 GPRC5AQ8NFJ5 357 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 STEAP2Q8NFT2 490 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 GANCQ8TET4 914 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 NR4A3Q92570 626 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 RPGRIP1Q96KN7 1286 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 C4orf36Q96KX1 117 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 C3orf30Q96M34 536 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 FICDQ9BVA6 458 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 GCOM2Q9BZD3 368 aaPredicted RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 C10orf88Q9H8K7 445 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 LRRC40Q9H9A6 602 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 PCDH9Q9HC56 1237 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 A4GALTQ9NPC4 353 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 ZNF701Q9NV72 531 aaPredicted RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 DDX18Q9NVP1 670 aaKnown RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 AMDHD2Q9Y303 409 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 OR2W1Q9Y3N9 320 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 IBTKQ9P2D0 1353 aaPredicted RBP4.72□□□□□ -1.65
CIT-211ENST00000541841 CEP152O94986 1710 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 NPATQ14207 1427 aa4.72□□□□□ -1.65
CIT-211ENST00000541841 NEURL4Q96JN8 1562 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 SCAF11Q99590 1463 aaKnown RBP4.71□□□□□ -1.66
CIT-211ENST00000541841 MLH3Q9UHC1 1453 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 C15orf38-AP3S2A0A0A6YYH1 394 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 A0A1W2PRB8 838 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 CCDC162PA2VCL2 907 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 C2orf81A6NN90 581 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 M0R296 226 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 NME2P1O60361 137 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 TBX19O60806 448 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 WDR1O75083 606 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 SYNGR4O95473 234 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 UGT2B4P06133 528 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 CYP3A5P20815 502 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 DLSTP36957 453 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 TMPOP42166 694 aaKnown RBP4.71□□□□□ -1.66
CIT-211ENST00000541841 MAGEA11P43364 429 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 THOP1P52888 689 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 KCNK10P57789 538 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 TAF10Q12962 218 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 DMP1Q13316 513 aaPredicted RBP4.71□□□□□ -1.66
CIT-211ENST00000541841 HLFQ16534 295 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 PHKG1Q16816 387 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 ZNF718Q3SXZ3 478 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 TMEM35AQ53FP2 167 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 AGKQ53H12 422 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 ARMCX4Q5H9R4 360 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 LIPKQ5VXJ0 399 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 NKAIN2Q5VXU1 208 aa4.71□□□□□ -1.66
CIT-211ENST00000541841 CTR9Q6PD62 1173 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms