RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 TCEAL6Q6IPX3 200 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 KIAA1211LQ6NV74 962 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 IL27RAQ6UWB1 636 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 CBLL1Q75N03 491 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 GPRIN1Q7Z2K8 1008 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 MILR1Q7Z6M3 343 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ZBTB46Q86UZ6 589 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 P3H2Q8IVL5 708 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 RAVER1Q8IY67 606 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 PEX5LQ8IYB4 626 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ZZZ3Q8IYH5 903 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 DNAJC22Q8N4W6 341 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 FAM86B1Q8N7N1 296 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 FAM181AQ8N9Y4 354 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 IL17RCQ8NAC3 791 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 TSTD1Q8NFU3 115 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ELOA3Q8NG57 546 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 RPLP0P6Q8NHW5 317 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 PMM1Q92871 262 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 TCEAL3Q969E4 200 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 KIAA1143Q96AT1 154 aaPredicted RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 METTL2AQ96IZ6 378 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ACOX2Q99424 681 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 PKMYT1Q99640 499 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 SLC30A2Q9BRI3 323 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 COPS4Q9BT78 406 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 SIK2Q9H0K1 926 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 TMEM245Q9H330 911 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 SLC32A1Q9H598 525 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 RDH14Q9HBH5 336 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 MRPL39Q9NYK5 338 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 SLC25A37Q9NYZ2 338 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 CD274Q9NZQ7 290 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 FRRS1LQ9P0K9 344 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 REV1Q9UBZ9 1251 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 KLHL21Q9UJP4 597 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 STUB1Q9UNE7 303 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 CCL26Q9Y258 94 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 RBMX2Q9Y388 322 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 DHRS7Q9Y394 339 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 PCDHB1Q9Y5F3 818 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 HS3ST4Q9Y661 456 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 SPEGQ15772 3267 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ACACAQ13085 2346 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 DSPP15924 2871 aaKnown RBP7.34□□□□□ -1.24
CCDC60-204ENST00000539847 TRAV19A0A0A6YYK7 116 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 TEX51A0A1B0GUA7 166 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 C2orf81A6NN90 581 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 FADS2P1A8MWK0 482 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 BTN3A1O00481 513 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 OR7A17O14581 309 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 TNFRSF10CO14798 259 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 PLD2O14939 933 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 PRAMEF11O60813 436 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 RGS9O75916 674 aaPredicted RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 FADS2O95864 444 aaKnown RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 FABP3P05413 133 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 PIPP12273 146 aaPredicted RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 SPNP16150 400 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 ALOX12P18054 663 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 GPX2P18283 190 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 ENDOUP21128 410 aaKnown RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 PPIBP23284 216 aaKnown RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 RPS3P23396 243 aaKnown RBP eCLIP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 CHMP24386 653 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 PTBP1P26599 531 aaKnown RBP eCLIP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 PTPN6P29350 595 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 HLA-FP30511 346 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 FMO4P31512 558 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 S100A3P33764 101 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 KDELR2P33947 212 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 KRT20P35900 424 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 RGS6P49758 472 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 HK3P52790 923 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 DGKQP52824 942 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 ITGA1P56199 1179 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 P2RX3P56373 397 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 RAB25P57735 213 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 LSM3P62310 102 aaKnown RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 DSC2Q02487 901 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 SRSF11Q05519 484 aaKnown RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 SLC10A7Q0GE19 358 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 LRRC74AQ0VAA2 488 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 ASAH1Q13510 395 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 GTF2H2Q13888 395 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 MAPK11Q15759 364 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 C5orf22Q49AR2 442 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 RFTN2Q52LD8 501 aaPredicted RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 FNDC3BQ53EP0 1204 aaKnown RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 TXNDC8Q6A555 127 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 GTF2H2CQ6P1K8 395 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 LETMD1Q6P1Q0 360 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 CERS6Q6ZMG9 384 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 Q6ZNB5 142 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF767PQ75MW2 155 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 NLRC3Q7RTR2 1065 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 C14orf80Q86SX3 495 aa7.33□□□□□ -1.24
CCDC60-204ENST00000539847 LDB1Q86U70 411 aaPredicted RBP7.33□□□□□ -1.24
CCDC60-204ENST00000539847 NOXA1Q86UR1 476 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms