RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	ALG9	Q9H6U8	611 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	RNPEPL1	Q9HAU8	725 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	TCF7L1	Q9HCS4	588 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	HRASLS2	Q9NWW9	162 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	SOHLH2	Q9NX45	425 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	DLL3	Q9NYJ7	618 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	WWOX	Q9NZC7	414 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	SPATA7	Q9P0W8	599 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	CPSF2	Q9P2I0	782 aa	Known RBP	4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	DCDC2	Q9UHG0	476 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	TMCO1	Q9UM00	188 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	G3BP2	Q9UN86	482 aa	Known RBP	4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	ICK	Q9UPZ9	632 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	CLCA2	Q9UQC9	943 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	PDE10A	Q9Y233	779 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	STK38L	Q9Y2H1	464 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	OARD1	Q9Y530	152 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	USH1C	Q9Y6N9	552 aa		4.13	□□□□□ -1.75
SNHG1-208	ENST00000538266	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	PTPRZ1	P23471	2315 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	RIF1	Q5UIP0	2472 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	GOLGA4	Q13439	2230 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	IGHV5-10-1	A0A0J9YXX1	117 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266		A0A1W2PPM1	405 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266		A0A1W2PQM1	296 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	KRTAP23-1	A1A580	65 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	KRT87P	A6NCN2	255 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266		A8MU76	341 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266		A8MUI8	341 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	NTN3	O00634	580 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TOX3	O15405	576 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	PRPF4	O43172	522 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	B4GAT1	O43505	415 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	SMIM24	O75264	130 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CS	O75390	466 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	RFPL1	O75677	317 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	WDR47	O94967	919 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TOP3B	O95985	862 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	AMY1A	P04745	511 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TPBGL	P0DKB5	382 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TROVE2	P10155	538 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	PF4V1	P10720	104 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CD1D	P15813	335 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ACADS	P16219	412 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	UGT2B7	P16662	529 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TAC1	P20366	129 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	DDC	P20711	480 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ATP6V1C1	P21283	382 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CDH3	P22223	829 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	IMPA1	P29218	277 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CMPK1	P30085	196 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CSTF2	P33240	577 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ARL1	P40616	181 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	MAN2A2	P49641	1150 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CSRP3	P50461	194 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	SLC18A1	P54219	525 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ALDH18A1	P54886	795 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	INHBC	P55103	352 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	GFER	P55789	205 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TBPL1	P62380	186 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	HSD11B2	P80365	405 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CDKL1	Q00532	357 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.12	□□□□□ -1.75	6e-19	■■■□□ 14.9
SNHG1-208	ENST00000538266	NAE1	Q13564	534 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.12	□□□□□ -1.75	2e-56	■■■■□ 20.9
SNHG1-208	ENST00000538266	CDSN	Q15517	529 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	OR4D1	Q15615	310 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CYP2A13	Q16696	494 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	PPP1R3A	Q16821	1122 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	PFKFB4	Q16877	469 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	SLC5A12	Q1EHB4	618 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	C3orf36	Q3SXR2	165 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CCDC153	Q494R4	210 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	NRN1L	Q496H8	165 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CCSMST1	Q4G0I0	132 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TMTC4	Q5T4D3	741 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	HHAT	Q5VTY9	493 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CACHD1	Q5VU97	1274 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CGB2	Q6NT52	195 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TMEM71	Q6P5X7	295 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	AGTRAP	Q6RW13	159 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	SPESP1	Q6UW49	350 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	SUSD1	Q6UWL2	747 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	CYHR1	Q6ZMK1	362 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	MBOAT1	Q6ZNC8	495 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	DGLUCY	Q7Z3D6	616 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ADCK2	Q7Z695	626 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ISCA2	Q86U28	154 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TRABD2A	Q86V40	505 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	C17orf64	Q86WR6	236 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TMPRSS12	Q86WS5	348 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	ADGRF3	Q8IZF5	1079 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	C4orf33	Q8N1A6	199 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	FBXO39	Q8N4B4	442 aa		4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	C2orf73	Q8N5S3	287 aa	Predicted RBP	4.12	□□□□□ -1.75
SNHG1-208	ENST00000538266	TBC1D19	Q8N5T2	526 aa		4.12	□□□□□ -1.75

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