RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 LRRC70Q7Z2Q7 622 aa9□□□□□ -0.97
CHD4-207ENST00000537634 CTAGE3PQ8IX95 158 aa9□□□□□ -0.97
CHD4-207ENST00000537634 ZNF295-AS1Q8N0V1 137 aa9□□□□□ -0.97
CHD4-207ENST00000537634 MORN4Q8NDC4 146 aa9□□□□□ -0.97
CHD4-207ENST00000537634 CHTF18Q8WVB6 975 aa9□□□□□ -0.97
CHD4-207ENST00000537634 SREK1Q8WXA9 508 aaKnown RBP9□□□□□ -0.97
CHD4-207ENST00000537634 UBE2E3Q969T4 207 aa9□□□□□ -0.97
CHD4-207ENST00000537634 WDR34Q96EX3 536 aa9□□□□□ -0.97
CHD4-207ENST00000537634 F2RL3Q96RI0 385 aa9□□□□□ -0.97
CHD4-207ENST00000537634 RASL10BQ96S79 203 aa9□□□□□ -0.97
CHD4-207ENST00000537634 SPOCK3Q9BQ16 436 aa9□□□□□ -0.97
CHD4-207ENST00000537634 ALOXE3Q9BYJ1 711 aa9□□□□□ -0.97
CHD4-207ENST00000537634 OR8D2Q9GZM6 311 aa9□□□□□ -0.97
CHD4-207ENST00000537634 TP63Q9H3D4 680 aaPredicted RBP9□□□□□ -0.97
CHD4-207ENST00000537634 LIN28AQ9H9Z2 209 aaKnown RBP9□□□□□ -0.97
CHD4-207ENST00000537634 LYRM4Q9HD34 91 aa9□□□□□ -0.97
CHD4-207ENST00000537634 WHRNQ9P202 907 aa9□□□□□ -0.97
CHD4-207ENST00000537634 MYOTQ9UBF9 498 aa9□□□□□ -0.97
CHD4-207ENST00000537634 COPS7AQ9UBW8 275 aa9□□□□□ -0.97
CHD4-207ENST00000537634 PTBP2Q9UKA9 531 aaKnown RBP9□□□□□ -0.97
CHD4-207ENST00000537634 ZNF490Q9ULM2 529 aaPredicted RBP9□□□□□ -0.97
CHD4-207ENST00000537634 MYOCOSA0A1B0GUC4 107 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 FAM159BA6NKW6 160 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 FAM166BA8MTA8 275 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 C17orf105B2RV13 164 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 SUPT3HB4E1H0 165 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 LDB3O75112 727 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 SUPT3HO75486 399 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 PDE9AO76083 593 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 PCNAP12004 261 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 COX7A2P14406 83 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 CD22P20273 847 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 SERPINB1P30740 379 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 SPRP35270 261 aaPredicted RBP8.99□□□□□ -0.97
CHD4-207ENST00000537634 SOX3P41225 446 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 SSR2P43308 183 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 HK2P52789 917 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 PPIAP62937 165 aaKnown RBP8.99□□□□□ -0.97
CHD4-207ENST00000537634 SLMAPQ14BN4 828 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 ZKSCAN8Q15776 578 aaPredicted RBP8.99□□□□□ -0.97
CHD4-207ENST00000537634 TBCCQ15814 346 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 AP5B1Q2VPB7 878 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 TMEM35AQ53FP2 167 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 MEX3BQ6ZN04 569 aaKnown RBP8.99□□□□□ -0.97
CHD4-207ENST00000537634 ZNF793Q6ZN11 406 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 RTL4Q6ZR62 310 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 RGS9BPQ6ZS82 235 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 GK5Q6ZS86 529 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 CEP128Q6ZU80 1094 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 C3orf62Q6ZUJ4 267 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 RAPH1Q70E73 1250 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 MAATS1Q7Z4T9 603 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 TBC1D1Q86TI0 1168 aaPredicted RBP8.99□□□□□ -0.97
CHD4-207ENST00000537634 SLC22A16Q86VW1 577 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 ACOT4Q8N9L9 421 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 OR2M7Q8NG81 312 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 OR52N2Q8NGI0 321 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 OR5L2Q8NGL0 311 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 STAG3L4Q8TBR4 150 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 PTPMT1Q8WUK0 201 aaPredicted RBP8.99□□□□□ -0.97
CHD4-207ENST00000537634 ASB5Q8WWX0 329 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 C14orf79Q96F83 325 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 UBXN10Q96LJ8 280 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 MAPKAP1Q9BPZ7 522 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 ERP44Q9BS26 406 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 TBCDQ9BTW9 1192 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 MS4A8Q9BY19 250 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 CD244Q9BZW8 370 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 PHACTR1Q9C0D0 580 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 DEFB127Q9H1M4 99 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 ALG9Q9H6U8 611 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 PRDM7Q9NQW5 492 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 PLSCR2Q9NRY7 297 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 DEPPQ9NTK1 212 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 NUDT4Q9NZJ9 180 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 OPTCQ9UBM4 332 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 VTI1BQ9UEU0 232 aa8.99□□□□□ -0.97
CHD4-207ENST00000537634 A0A0G2JMM0 328 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 A0A1W2PPB8 328 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 A0A1W2PRS3 328 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 TMEM200CA6NKL6 621 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 KIR3DP1A8MWS1 328 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 G3V3Y1 287 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 RTCAO00442 366 aaKnown RBP8.98□□□□□ -0.97
CHD4-207ENST00000537634 FANCGO15287 622 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 RAD51CO43502 376 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 SH3BGRLO75368 114 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 GSTA2P09210 222 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 EPORP19235 508 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 CAPN3P20807 821 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 HIST1H1TP22492 207 aaPredicted RBP8.98□□□□□ -0.97
CHD4-207ENST00000537634 CPN2P22792 545 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 ATP5A1P25705 553 aaKnown RBP8.98□□□□□ -0.97
CHD4-207ENST00000537634 CHRNB4P30926 498 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 CASP2P42575 452 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 RAP1GDS1P52306 607 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 RNF4P78317 190 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 ID2Q02363 134 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 TLE4Q04727 773 aa8.98□□□□□ -0.97
CHD4-207ENST00000537634 ZNF750Q32MQ0 723 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms