RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-206	ENST00000536823	LUZP4	Q9P127	313 aa		6.64	□□□□□ -1.35
YBX3-206	ENST00000536823	TXNDC16	Q9P2K2	825 aa		6.64	□□□□□ -1.35
YBX3-206	ENST00000536823	CTNNAL1	Q9UBT7	734 aa		6.64	□□□□□ -1.35
YBX3-206	ENST00000536823	B3GNT3	Q9Y2A9	372 aa		6.64	□□□□□ -1.35
YBX3-206	ENST00000536823	ZNF281	Q9Y2X9	895 aa		6.64	□□□□□ -1.35
YBX3-206	ENST00000536823	MTO1	Q9Y2Z2	717 aa	Known RBP	6.64	□□□□□ -1.35
YBX3-206	ENST00000536823	SLC22A7	Q9Y694	548 aa		6.64	□□□□□ -1.35
YBX3-206	ENST00000536823	LOC102723996	A0A087X1L8	192 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	IGHV1-45	A0A0A0MS14	117 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	NSG1	A0A0A6YYJ2	146 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	CLEC18A	A5D8T8	446 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	PHGDH	O43175	533 aa	Known RBP	6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	NDUFS4	O43181	175 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	OR1F1	O43749	312 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	RDH16	O75452	317 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	JRK	O75564	520 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	PRR35	P0CG20	571 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	STMN1	P16949	149 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	CXCR2	P25025	360 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	SPR	P35270	261 aa	Predicted RBP	6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	AHR	P35869	848 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	MAGEA4	P43358	317 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	XCR1	P46094	333 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	SLC6A12	P48065	614 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	HNMT	P50135	292 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	EFNA3	P52797	238 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	SKP1	P63208	163 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	EEF1A2	Q05639	463 aa	Known RBP	6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	RGS1	Q08116	209 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823		Q0VFX4	171 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	NAB1	Q13506	487 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	CSHL1	Q14406	222 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	HERC3	Q15034	1050 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	PCOLCE	Q15113	449 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	TRADD	Q15628	312 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	INPP5J	Q15735	1006 aa	Predicted RBP	6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	ZKSCAN8	Q15776	578 aa	Predicted RBP	6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	WHAMMP3	Q1A5X7	153 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	KBTBD12	Q3ZCT8	623 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	CDKL4	Q5MAI5	379 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	CATSPERE	Q5SY80	951 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	AGAP7P	Q5VUJ5	663 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	FAAH2	Q6GMR7	532 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	TMEM205	Q6UW68	189 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	IGFL2	Q6UWQ7	119 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	CLEC18B	Q6UXF7	455 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	RNF111	Q6ZNA4	994 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823		Q6ZS92	163 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	C3orf62	Q6ZUJ4	267 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	TMPRSS11B	Q86T26	416 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	THOC6	Q86W42	341 aa	Known RBP	6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	PDSS2	Q86YH6	399 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	CTAGE3P	Q8IX95	158 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	IQCK	Q8N0W5	287 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	ZADH2	Q8N4Q0	377 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	AFAP1L2	Q8N4X5	818 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	CLEC18C	Q8NCF0	446 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	NT5C	Q8TCD5	201 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	PPP4R1	Q8TF05	950 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	RHBDF1	Q96CC6	855 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	C1orf159	Q96HA4	380 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	THOC3	Q96J01	351 aa	Known RBP	6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	AGAP4	Q96P64	663 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	EGFL8	Q99944	293 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	WDR77	Q9BQA1	342 aa	Predicted RBP	6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	AIF1L	Q9BQI0	150 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	ZNF700	Q9H0M5	742 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	EPS8L2	Q9H6S3	715 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	CAB39L	Q9H9S4	337 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	ZBTB20	Q9HC78	741 aa	Predicted RBP	6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	ZNF160	Q9HCG1	818 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	ANKH	Q9HCJ1	492 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	SLAMF7	Q9NQ25	335 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	ZDHHC18	Q9NUE0	388 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	HCN3	Q9P1Z3	774 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	ZFP69B	Q9UJL9	534 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	KCNE2	Q9Y6J6	123 aa		6.63	□□□□□ -1.35
YBX3-206	ENST00000536823	TRBV23-1	A0A0A0MS06	115 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	ZNF860	A6NHJ4	632 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	SGK494	L7N484	410 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	DLX3	O60479	287 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	FAM155B	O75949	473 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	URI1	O94763	535 aa	Predicted RBP	6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	WDR47	O94967	919 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	SERPINA7	P05543	415 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	ZNF888	P0CJ79	500 aa	Predicted RBP	6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	CCDC166	P0CW27	439 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	C8orf89	P0DMQ9	161 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	CD1D	P15813	335 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	ALOX12	P18054	663 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	ENDOU	P21128	410 aa	Known RBP	6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	UQCRFS1	P47985	274 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	SLURP1	P55000	103 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	PCBP3	P57721	371 aa	Known RBP	6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	RAB10	P61026	200 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	ATP6V0D1	P61421	351 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	AP2B1	P63010	937 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	GUCY2D	Q02846	1103 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	CDC16	Q13042	620 aa		6.62	□□□□□ -1.35
YBX3-206	ENST00000536823	MFAP5	Q13361	173 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms