RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ZNF770Q6IQ21 691 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 KLHL17Q6TDP4 642 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 ZNF367Q7RTV3 350 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 NEURL3Q96EH8 262 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 CDADC1Q9BWV3 514 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 TMEM121BQ9BXQ6 578 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 C6orf62Q9GZU0 229 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 CXorf36Q9H7Y0 433 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 CCDC59Q9P031 241 aaKnown RBP15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 ASF1AQ9Y294 204 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 SNX8Q9Y5X2 465 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 LAMA3Q16787 3333 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 NOTCH4Q99466 2003 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 TMEM221A6NGB7 291 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 DSCR3O14972 297 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 TBX19O60806 448 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 SEMA3DO95025 777 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 DBTP11182 482 aaKnown RBP15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 KELP23276 732 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 CHMP24386 653 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 S100A5P33763 92 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 METAP1P53582 386 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 DEPDC1Q5TB30 811 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 C19orf48Q6RUI8 117 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 FAM92BQ6ZTR7 304 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 PTCHD4Q6ZW05 846 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 SLC38A5Q8WUX1 472 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 OR5P2Q8WZ92 322 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 OR52A5Q9H2C5 316 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 RHBGQ9H310 441 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 CLN6Q9NWW5 311 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 FTSJ1Q9UET6 329 aa15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 CFAP20Q9Y6A4 193 aaKnown RBP15.28■□□□□ 0.04
CHMP1A-202ENST00000535997 NINQ8N4C6 2090 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 LRRK1Q38SD2 2015 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 LOC100506127A0A0U1RQW1 187 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 ANKDD1BA6NHY2 528 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 C5orf58C9J3I9 102 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 LZTS3O60299 673 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 RECKO95980 971 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 ADH5P11766 374 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 C6P13671 934 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 GRK5P34947 590 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 ALDH9A1P49189 494 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 HTRA4P83105 476 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 PRKCDQ05655 676 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 TPRG1LQ5T0D9 272 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 LYSMD2Q8IV50 215 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 TAGAPQ8N103 731 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 FAM46DQ8NEK8 389 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 APOBEC4Q8WW27 367 aaKnown RBP15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 SORBS1Q9BX66 1292 aaKnown RBP15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 OR51E2Q9H255 320 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 NMNAT1Q9HAN9 279 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 A4GALTQ9NPC4 353 aa15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 SCHIP1Q9P0W5 487 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-202ENST00000535997 DSPPQ9NZW4 1301 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 FFAR1O14842 300 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 ZW10O43264 779 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 MMP20O60882 483 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 CYP17A1P05093 508 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 DDX5P17844 614 aaKnown RBP15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 CXCR2P25025 360 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 EIF2B2P49770 351 aaKnown RBP15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 MANFP55145 182 aaKnown RBP15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 NTHL1P78549 312 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 RPA4Q13156 261 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 HEPACAMQ14CZ8 416 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 TIMM50Q3ZCQ8 353 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 KHDRBS2Q5VWX1 349 aaKnown RBP15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 PLPP4Q5VZY2 271 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 SAXO2Q658L1 398 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 PNCKQ6P2M8 343 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 C11orf96Q7Z7L8 435 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 TMCC3Q9ULS5 477 aa15.27■□□□□ 0.03
CHMP1A-202ENST00000535997 PLPP1O14494 284 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 AQP9O43315 295 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 ADAP00813 363 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 HSMCR30P0CW71 290 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 FUT4P22083 530 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 MAPK12P53778 367 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 CYP4F2P78329 520 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 ARHGAP19Q14CB8 494 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 C9orf64Q5T6V5 341 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 PLAG1Q6DJT9 500 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 MMP21Q8N119 569 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 OR8D1Q8WZ84 308 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 ARRDC3Q96B67 414 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 TM4SF18Q96CE8 201 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 IL17FQ96PD4 163 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 MGLLQ99685 303 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 CENPOQ9BU64 300 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 CRISPLD2Q9H0B8 497 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 NEUROD4Q9HD90 331 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 ABCB10Q9NRK6 738 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 RHCGQ9UBD6 479 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 SLC6A14Q9UN76 642 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 PEX16Q9Y5Y5 336 aa15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 HOXC11O43248 304 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-202ENST00000535997 MFN2O95140 757 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms