RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 HOXD1Q9GZZ0 328 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 C12orf65Q9H3J6 166 aaKnown RBP10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 SLC6A14Q9UN76 642 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 WDR45Q9Y484 360 aa10.82□□□□□ -0.68
AMBRA1-211ENST00000533727 SLC22A1O15245 554 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 EMC8O43402 210 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 AHCYP23526 432 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 ABHD18Q0P651 414 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 RNF121Q9H920 327 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 PLEKHA1Q9HB21 404 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 IL26Q9NPH9 171 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 C17orf113A0A1B0GUU1 675 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 H3BSA7 217 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 RLN1P04808 185 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 CD9P21926 228 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 CDK6Q00534 326 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 DEFB134Q4QY38 66 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 ZZZ3Q8IYH5 903 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 TP53INP1Q96A56 240 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 KCNK13Q9HB14 408 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 ARNT2Q9HBZ2 717 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 MKS1Q9NXB0 559 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 KLF15Q9UIH9 416 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 TTLL8A6PVC2 850 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 GMFGO60234 142 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 PCDHGA12O60330 932 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 OMPP47874 163 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 ST3GAL3Q11203 375 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 VWA5B1Q5TIE3 1220 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 SLC30A6Q6NXT4 461 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 PARM1Q6UWI2 310 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 GLIS1Q8NBF1 620 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 SERINC2Q96SA4 455 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 CD180Q99467 661 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 XIRP1Q702N8 1843 aaKnown RBP10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF99A8MXY4 864 aaPredicted RBP10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 SERPINA3P01011 423 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 PGRP06401 933 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 MATN1P21941 496 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 OTX2P32243 289 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 RASGEF1BQ0VAM2 473 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 TECRLQ5HYJ1 363 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF648Q5T619 568 aaPredicted RBP10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 OR4F3Q6IEY1 312 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 SLC5A8Q8N695 610 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 MDGA1Q8NFP4 955 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 RLN3Q8WXF3 142 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 CGREF1Q99674 301 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 PCED1AQ9H1Q7 454 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 EHD1Q9H4M9 534 aa10.81□□□□□ -0.68
AMBRA1-211ENST00000533727 MYO9BQ13459 2157 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 LAMB1P07942 1786 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF831Q5JPB2 1677 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 LY75O60449 1722 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 OR14I1A6ND48 311 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 NPIPA5E9PKD4 350 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 IFI30P13284 250 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 PORP16435 677 aaPredicted RBP10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 ENGP17813 658 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 RRADP55042 308 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 E2F2Q14209 437 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 TMEM52BQ4KMG9 183 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 ZFAND4Q86XD8 727 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 ARHGAP12Q8IWW6 846 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 SDR16C5Q8N3Y7 309 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 GALNT6Q8NCL4 622 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 OR52E4Q8NGH9 312 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 NEK7Q8TDX7 302 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 SNX33Q8WV41 574 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 HAVCR1Q96D42 359 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF317Q96PQ6 595 aaPredicted RBP10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 SLC39A1Q9NY26 324 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 PPP4R1LQ9P1A2 415 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 LRIT1Q9P2V4 623 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 NPIPA1Q9UND3 350 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 PCDHGB1Q9Y5G3 927 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 COL5A3P25940 1745 aaPredicted RBP10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 TNFRSF10CO14798 259 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 PROM1O43490 865 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 MT-ND1P03886 318 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 MTHFD1P11586 935 aaKnown RBP10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 CNR2P34972 360 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 CDH12P55289 794 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 RBPJQ06330 500 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 SLAMF1Q13291 335 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 OLIG2Q13516 323 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 RAPSNQ13702 412 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 MOGQ16653 247 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 MSS51Q4VC12 460 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 UNQ6126/PRO20091Q6UXV3 157 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 HSD11B1LQ7Z5J1 315 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 PPP1R3BQ86XI6 285 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 ZDHHC21Q8IVQ6 265 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 FCGR1BQ92637 280 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 YTHDF1Q9BYJ9 559 aaKnown RBP10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 MTG2Q9H4K7 406 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 SLC17A6Q9P2U8 582 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 CPNE7Q9UBL6 633 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 LHX3Q9UBR4 397 aa10.8□□□□□ -0.68
AMBRA1-211ENST00000533727 PRAMEF33A0A0G2JMD5 474 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms