RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 TLX2O43763 284 aaPredicted RBP2.58□□□□□ -2
CD44-234ENST00000531873 KRT86O43790 486 aa2.58□□□□□ -2
CD44-234ENST00000531873 OR6A2O95222 327 aa2.58□□□□□ -2
CD44-234ENST00000531873 SYNGR4O95473 234 aa2.58□□□□□ -2
CD44-234ENST00000531873 DIRAS3O95661 229 aa2.58□□□□□ -2
CD44-234ENST00000531873 EML2O95834 649 aa2.58□□□□□ -2
CD44-234ENST00000531873 ANGPTL1O95841 491 aa2.58□□□□□ -2
CD44-234ENST00000531873 SELEP16581 610 aa2.58□□□□□ -2
CD44-234ENST00000531873 C4BPBP20851 252 aa2.58□□□□□ -2
CD44-234ENST00000531873 AADACP22760 399 aa2.58□□□□□ -2
CD44-234ENST00000531873 KRTAP5-9P26371 169 aa2.58□□□□□ -2
CD44-234ENST00000531873 CCKARP32238 428 aa2.58□□□□□ -2
CD44-234ENST00000531873 MAP2K2P36507 400 aa2.58□□□□□ -2
CD44-234ENST00000531873 LIMK2P53671 638 aa2.58□□□□□ -2
CD44-234ENST00000531873 SLC26A5P58743 744 aa2.58□□□□□ -2
CD44-234ENST00000531873 SSTP61278 116 aa2.58□□□□□ -2
CD44-234ENST00000531873 PRKCEQ02156 737 aa2.58□□□□□ -2
CD44-234ENST00000531873 POU3F1Q03052 451 aaPredicted RBP2.58□□□□□ -2
CD44-234ENST00000531873 HSPA14Q0VDF9 509 aa2.58□□□□□ -2
CD44-234ENST00000531873 SGCGQ13326 291 aa2.58□□□□□ -2
CD44-234ENST00000531873 DPYSQ14117 519 aa2.58□□□□□ -2
CD44-234ENST00000531873 KRT81Q14533 505 aa2.58□□□□□ -2
CD44-234ENST00000531873 EXOSC7Q15024 291 aaKnown RBP2.58□□□□□ -2
CD44-234ENST00000531873 TAF7Q15545 349 aaPredicted RBP2.58□□□□□ -2
CD44-234ENST00000531873 TRADDQ15628 312 aa2.58□□□□□ -2
CD44-234ENST00000531873 TAB1Q15750 504 aa2.58□□□□□ -2
CD44-234ENST00000531873 FGD3Q5JSP0 725 aa2.58□□□□□ -2
CD44-234ENST00000531873 FFAR4Q5NUL3 377 aa2.58□□□□□ -2
CD44-234ENST00000531873 LDLRAP1Q5SW96 308 aa2.58□□□□□ -2
CD44-234ENST00000531873 STPG1Q5TH74 334 aa2.58□□□□□ -2
CD44-234ENST00000531873 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
CD44-234ENST00000531873 Q6ZVQ6 151 aa2.58□□□□□ -2
CD44-234ENST00000531873 AMZ2Q86W34 360 aa2.58□□□□□ -2
CD44-234ENST00000531873 HSCBQ8IWL3 235 aa2.58□□□□□ -2
CD44-234ENST00000531873 SLC22A15Q8IZD6 547 aa2.58□□□□□ -2
CD44-234ENST00000531873 NIPA2Q8N8Q9 360 aa2.58□□□□□ -2
CD44-234ENST00000531873 TMEM178AQ8NBL3 297 aa2.58□□□□□ -2
CD44-234ENST00000531873 LEMD2Q8NC56 503 aa2.58□□□□□ -2
CD44-234ENST00000531873 ZNF540Q8NDQ6 660 aa2.58□□□□□ -2
CD44-234ENST00000531873 IPMKQ8NFU5 416 aa2.58□□□□□ -2
CD44-234ENST00000531873 OR6M1Q8NGM8 313 aa2.58□□□□□ -2
CD44-234ENST00000531873 GANCQ8TET4 914 aa2.58□□□□□ -2
CD44-234ENST00000531873 SUSD6Q92537 303 aa2.58□□□□□ -2
CD44-234ENST00000531873 SYAP1Q96A49 352 aaPredicted RBP2.58□□□□□ -2
CD44-234ENST00000531873 ZNF501Q96CX3 271 aaPredicted RBP2.58□□□□□ -2
CD44-234ENST00000531873 OMA1Q96E52 524 aa2.58□□□□□ -2
CD44-234ENST00000531873 ZNF486Q96H40 463 aaPredicted RBP2.58□□□□□ -2
CD44-234ENST00000531873 IL12RB2Q99665 862 aa2.58□□□□□ -2
CD44-234ENST00000531873 NKX3-1Q99801 234 aaPredicted RBP2.58□□□□□ -2
CD44-234ENST00000531873 FUNDC2Q9BWH2 189 aa2.58□□□□□ -2
CD44-234ENST00000531873 WWP1Q9H0M0 922 aa2.58□□□□□ -2
CD44-234ENST00000531873 RAB17Q9H0T7 212 aa2.58□□□□□ -2
CD44-234ENST00000531873 CXXC4Q9H2H0 198 aa2.58□□□□□ -2
CD44-234ENST00000531873 TMEM231Q9H6L2 316 aa2.58□□□□□ -2
CD44-234ENST00000531873 ECT2Q9H8V3 914 aa2.58□□□□□ -2
CD44-234ENST00000531873 MARCH7Q9H992 704 aa2.58□□□□□ -2
CD44-234ENST00000531873 VIPAS39Q9H9C1 493 aa2.58□□□□□ -2
CD44-234ENST00000531873 S100A14Q9HCY8 104 aa2.58□□□□□ -2
CD44-234ENST00000531873 POLE3Q9NRF9 147 aa2.58□□□□□ -2
CD44-234ENST00000531873 C2orf42Q9NWW7 574 aa2.58□□□□□ -2
CD44-234ENST00000531873 TMEM181Q9P2C4 612 aa2.58□□□□□ -2
CD44-234ENST00000531873 CLIP2Q9UDT6 1046 aa2.58□□□□□ -2
CD44-234ENST00000531873 TEKT2Q9UIF3 430 aa2.58□□□□□ -2
CD44-234ENST00000531873 MRTO4Q9UKD2 239 aaKnown RBP2.58□□□□□ -2
CD44-234ENST00000531873 ENTPD4Q9Y227 616 aa2.58□□□□□ -2
CD44-234ENST00000531873 C2CD2Q9Y426 696 aa2.58□□□□□ -2
CD44-234ENST00000531873 ATG4BQ9Y4P1 393 aa2.58□□□□□ -2
CD44-234ENST00000531873 AP1M2Q9Y6Q5 423 aa2.58□□□□□ -2
CD44-234ENST00000531873 ZMYM6O95789 1325 aa2.58□□□□□ -2
CD44-234ENST00000531873 GON4LQ3T8J9 2241 aa2.57□□□□□ -2
CD44-234ENST00000531873 A0A0G2JLW4 131 aa2.57□□□□□ -2
CD44-234ENST00000531873 A8MU76 341 aa2.57□□□□□ -2
CD44-234ENST00000531873 ERVV-2B6SEH9 535 aa2.57□□□□□ -2
CD44-234ENST00000531873 BLOC1S5-TXNDC5H3BN57 136 aa2.57□□□□□ -2
CD44-234ENST00000531873 NDC80O14777 642 aa2.57□□□□□ -2
CD44-234ENST00000531873 CHADO15335 359 aa2.57□□□□□ -2
CD44-234ENST00000531873 LMX1BO60663 402 aa2.57□□□□□ -2
CD44-234ENST00000531873 CSDE1O75534 798 aaKnown RBP2.57□□□□□ -2
CD44-234ENST00000531873 FGF19O95750 216 aa2.57□□□□□ -2
CD44-234ENST00000531873 IGLV2-11P01706 119 aa2.57□□□□□ -2
CD44-234ENST00000531873 IGHDP01880 384 aa2.57□□□□□ -2
CD44-234ENST00000531873 PROS1P07225 676 aa2.57□□□□□ -2
CD44-234ENST00000531873 NCF1P14598 390 aaPredicted RBP2.57□□□□□ -2
CD44-234ENST00000531873 MYOGP15173 224 aa2.57□□□□□ -2
CD44-234ENST00000531873 GNB3P16520 340 aa2.57□□□□□ -2
CD44-234ENST00000531873 EDNRAP25101 427 aa2.57□□□□□ -2
CD44-234ENST00000531873 PKLRP30613 574 aa2.57□□□□□ -2
CD44-234ENST00000531873 STIP1P31948 543 aaKnown RBP2.57□□□□□ -2
CD44-234ENST00000531873 PRDX2P32119 198 aa2.57□□□□□ -2
CD44-234ENST00000531873 KIF5BP33176 963 aa2.57□□□□□ -2
CD44-234ENST00000531873 FEN1P39748 380 aaKnown RBP2.57□□□□□ -2
CD44-234ENST00000531873 MDH1P40925 334 aaKnown RBP2.57□□□□□ -2
CD44-234ENST00000531873 IRX4P78413 519 aa2.57□□□□□ -2
CD44-234ENST00000531873 PMP22Q01453 160 aa2.57□□□□□ -2
CD44-234ENST00000531873 HNRNPDQ14103 355 aaKnown RBP2.57□□□□□ -2
CD44-234ENST00000531873 PDIA5Q14554 519 aa2.57□□□□□ -2
CD44-234ENST00000531873 MTF1Q14872 753 aa2.57□□□□□ -2
CD44-234ENST00000531873 TEAD2Q15562 447 aa2.57□□□□□ -2
CD44-234ENST00000531873 GPAT3Q53EU6 434 aa2.57□□□□□ -2
CD44-234ENST00000531873 MPPE1Q53F39 396 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms