RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	LETMD1	Q6P1Q0	360 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	PRSS48	Q7RTY5	328 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	KANSL1	Q7Z3B3	1105 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ZBTB46	Q86UZ6	589 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	HIPK1	Q86Z02	1210 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	EID3	Q8N140	333 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	FAM86B1	Q8N7N1	296 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	FAM181A	Q8N9Y4	354 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	OR2L8	Q8NGY9	312 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	OR56A3	Q8NH54	315 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	PHF10	Q8WUB8	498 aa	Known RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ZNF480	Q8WV37	535 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC13A3	Q8WWT9	602 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	LCN9	Q8WX39	176 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	SMPDL3A	Q92484	453 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	PPP3R2	Q96LZ3	170 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ZBTB18	Q99592	522 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	GABARAPL1	Q9H0R8	117 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ANKH	Q9HCJ1	492 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ASIC5	Q9NY37	505 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ADGRE2	Q9UHX3	823 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	FAM32A	Q9Y421	112 aa	Known RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ANGPTL3	Q9Y5C1	460 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	HSPE1-MOB4	S4R3N1	261 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	LNP1	A1A4G5	178 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ELOVL7	A1L3X0	281 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	TMEM247	A6NEH6	219 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	LILRA5	A6NI73	299 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	FAM220BP	B1ANY3	271 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	NOBOX	O60393	691 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	INMT	O95050	263 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	FKBP9	O95302	570 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	GLB1	P16278	677 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	EPB42	P16452	691 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	AGXT	P21549	392 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	TGM1	P22735	817 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	PKLR	P30613	574 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	DCT	P40126	519 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC6A12	P48065	614 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	SERPINB10	P48595	397 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	TMED10	P49755	219 aa	Known RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	EIF2B2	P49770	351 aa	Known RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	EPHA4	P54764	986 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	DGUOK	Q16854	277 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	FBXO48	Q5FWF7	155 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLCO6A1	Q86UG4	719 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	AMIGO1	Q86WK6	493 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	MICU2	Q8IYU8	434 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ARL14	Q8N4G2	192 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	SCAI	Q8N9R8	606 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	SETD9	Q8NE22	299 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	DNAJB8	Q8NHS0	232 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	FBXO30	Q8TB52	745 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	SETD7	Q8WTS6	366 aa	Known RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	FIG4	Q92562	907 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	REXO5	Q96IC2	774 aa	Known RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	DGCR6L	Q9BY27	220 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	SRMS	Q9H3Y6	488 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	GPRC5B	Q9NZH0	403 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	VAPA	Q9P0L0	249 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	POLR3H	Q9Y535	204 aa	Predicted RBP	13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ASB1	Q9Y576	335 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	ENTPD2	Q9Y5L3	495 aa		13.91	□□□□□ -0.18
NR1H3-231	ENST00000529540	CXCR6	O00574	342 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	FLRT2	O43155	660 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	EIF2S1	P05198	315 aa	Known RBP	13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	CAPN1	P07384	714 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	PNLIP	P16233	465 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	GRK6	P43250	576 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	GPR3	P46089	330 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	DUSP3	P51452	185 aa	Predicted RBP	13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	DGKQ	P52824	942 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	CXCR4	P61073	352 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	TAP2	Q03519	686 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	MAD2L1	Q13257	205 aa	Predicted RBP	13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	CDK5R2	Q13319	367 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	GPR18	Q14330	331 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	NR6A1	Q15406	480 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	PTCHD3	Q3KNS1	767 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	CCDC92	Q53HC0	331 aa	Predicted RBP	13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	RUNDC3A	Q59EK9	446 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	ATG9B	Q674R7	924 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	CALHM3	Q86XJ0	350 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	OR7A2P	Q8NGA2	310 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	OR52B6	Q8NGF0	335 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	OR6Q1	Q8NGQ2	317 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	METTL6	Q8TCB7	284 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	GTF2H4	Q92759	462 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	NAT6	Q93015	286 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	FAM162A	Q96A26	154 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	SLC38A3	Q99624	504 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	MENT	Q9BUN1	341 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	FSCN3	Q9NQT6	498 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms