RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 NINQ8N4C6 2090 aa11.36□□□□□ -0.59
SRPRA-202ENST00000527817 FREM3P0C091 2139 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 SDR42E2A6NKP2 422 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 C4orf51C9J302 202 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 CTNSO60931 367 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 CCL3P10147 92 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 RAB38P57729 211 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 STXBP1P61764 594 aaKnown RBP11.35□□□□□ -0.59
SRPRA-202ENST00000527817 BTN3A2P78410 334 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 CCZ1BP86790 482 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 CCZ1P86791 482 aaPredicted RBP11.35□□□□□ -0.59
SRPRA-202ENST00000527817 TBL3Q12788 808 aaKnown RBP11.35□□□□□ -0.59
SRPRA-202ENST00000527817 SLC13A2Q13183 592 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 RBBP5Q15291 538 aaKnown RBP11.35□□□□□ -0.59
SRPRA-202ENST00000527817 PIGGQ5H8A4 983 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 SLC22A10Q63ZE4 541 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 PAQR3Q6TCH7 311 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 NXPE4Q6UWF7 544 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 CXXC5Q7LFL8 322 aaKnown RBP11.35□□□□□ -0.59
SRPRA-202ENST00000527817 MYO1HQ8N1T3 1032 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 TXLNBQ8N3L3 684 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 NAXEQ8NCW5 288 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 TMEM52Q8NDY8 209 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 TNIP2Q8NFZ5 429 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 PTPMT1Q8WUK0 201 aaPredicted RBP11.35□□□□□ -0.59
SRPRA-202ENST00000527817 NANOS1Q8WY41 292 aaKnown RBP11.35□□□□□ -0.59
SRPRA-202ENST00000527817 ZNF669Q96BR6 464 aaPredicted RBP11.35□□□□□ -0.59
SRPRA-202ENST00000527817 FAR2Q96K12 515 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 AIF1LQ9BQI0 150 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 TRIM54Q9BYV2 358 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 QPCTLQ9NXS2 382 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 ARL15Q9NXU5 204 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 TAS2R13Q9NYV9 303 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 MRPS33Q9Y291 106 aaKnown RBP11.35□□□□□ -0.59
SRPRA-202ENST00000527817 MAD1L1Q9Y6D9 718 aa11.35□□□□□ -0.59
SRPRA-202ENST00000527817 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.35□□□□□ -0.59
SRPRA-202ENST00000527817 ZNF354AO60765 605 aaPredicted RBP11.34□□□□□ -0.59
SRPRA-202ENST00000527817 IFNA16P05015 189 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 RFPL3SP0C7P2 107 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 MLNP12872 115 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 HNRNPFP52597 415 aaKnown RBP11.34□□□□□ -0.59
SRPRA-202ENST00000527817 RNF4P78317 190 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 SORDQ00796 357 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 PCBP2Q15366 365 aaKnown RBP eCLIP11.34□□□□□ -0.59
SRPRA-202ENST00000527817 MPEG1Q2M385 716 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 TOR1AIP1Q5JTV8 583 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 CXorf67Q86X51 503 aaPredicted RBP11.34□□□□□ -0.59
SRPRA-202ENST00000527817 RNF10Q8N5U6 811 aaKnown RBP11.34□□□□□ -0.59
SRPRA-202ENST00000527817 OR14A16Q8NHC5 309 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 NEIL3Q8TAT5 605 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 LINC01560Q8TB33 94 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 GAL3ST3Q96A11 431 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 COX4I2Q96KJ9 171 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 REPIN1Q9BWE0 567 aaKnown RBP11.34□□□□□ -0.59
SRPRA-202ENST00000527817 ALOXE3Q9BYJ1 711 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 TSPY26PQ9H489 355 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 SH2D2AQ9NP31 389 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 ZFP64Q9NPA5 681 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 C20orf96Q9NUD7 363 aaPredicted RBP11.34□□□□□ -0.59
SRPRA-202ENST00000527817 ZKSCAN5Q9Y2L8 839 aa11.34□□□□□ -0.59
SRPRA-202ENST00000527817 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.33□□□□□ -0.6
SRPRA-202ENST00000527817 PABPN1LA6NDY0 278 aaKnown RBP11.33□□□□□ -0.6
SRPRA-202ENST00000527817 CLCA1A8K7I4 914 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 CYR61O00622 381 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 IL2RAP01589 272 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 HRGP04196 525 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 PIGAP37287 484 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 KCNJ1P48048 391 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 EFTUD2Q15029 972 aaKnown RBP eCLIP11.33□□□□□ -0.67e-7■■■□□ 19.2
SRPRA-202ENST00000527817 SF3B4Q15427 424 aaKnown RBP eCLIP11.33□□□□□ -0.62e-7■■■□□ 15.2
SRPRA-202ENST00000527817 ZNF791Q3KP31 576 aaPredicted RBP11.33□□□□□ -0.6
SRPRA-202ENST00000527817 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 CAPN12Q6ZSI9 719 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 LACC1Q8IV20 430 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 LRRC75A-AS1Q8N1F1 130 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 LRRC25Q8N386 305 aaPredicted RBP11.33□□□□□ -0.6
SRPRA-202ENST00000527817 ZNF321PQ8N8H1 164 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 RNF214Q8ND24 703 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 PAQR8Q8TEZ7 354 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 MAIP1Q8WWC4 291 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 MS4A6EQ96DS6 147 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 LINGO1Q96FE5 620 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 CAPZA3Q96KX2 299 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 TSNARE1Q96NA8 513 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 QRFPRQ96P65 431 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 EPB41L4BQ9H329 900 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 JKAMPQ9P055 326 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 DYRK1BQ9Y463 629 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 KCNE2Q9Y6J6 123 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 CAPN6Q9Y6Q1 641 aa11.33□□□□□ -0.6
SRPRA-202ENST00000527817 A0A088AWK7 358 aa11.32□□□□□ -0.6
SRPRA-202ENST00000527817 LRIT2A6NDA9 550 aa11.32□□□□□ -0.6
SRPRA-202ENST00000527817 B3GALT2O43825 422 aa11.32□□□□□ -0.6
SRPRA-202ENST00000527817 NRDCO43847 1150 aa11.32□□□□□ -0.6
SRPRA-202ENST00000527817 H2AFYO75367 372 aaKnown RBP11.32□□□□□ -0.6
SRPRA-202ENST00000527817 ENO2P09104 434 aaPredicted RBP11.32□□□□□ -0.6
SRPRA-202ENST00000527817 ZNF10P21506 573 aaPredicted RBP11.32□□□□□ -0.6
SRPRA-202ENST00000527817 SAT1P21673 171 aa11.32□□□□□ -0.6
SRPRA-202ENST00000527817 ZNF136P52737 540 aa11.32□□□□□ -0.6
SRPRA-202ENST00000527817 IL2P60568 153 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms