RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 FAM47EQ6ZV65 393 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CYS1Q717R9 158 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 PTAR1Q7Z6K3 402 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 SDCCAG8Q86SQ7 713 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 WDR5BQ86VZ2 330 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 TRIM69Q86WT6 500 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 HORMAD1Q86X24 394 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 MAML2Q8IZL2 1156 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 GALNT15Q8N3T1 639 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 DEFB119Q8N690 84 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 ARL6IP6Q8N6S5 226 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 PTGR2Q8N8N7 351 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 GPR26Q8NDV2 337 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CADM4Q8NFZ8 388 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 OR13C4Q8NGS5 318 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 OR4L1Q8NH43 312 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 GABPB2Q8TAK5 448 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 GSDMBQ8TAX9 411 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 DTX3LQ8TDB6 740 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 AENQ8WTP8 325 aaKnown RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 UBLCP1Q8WVY7 318 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 KAT2AQ92830 837 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 SLC25A28Q96A46 364 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CENPTQ96BT3 561 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 DNAJC1Q96KC8 554 aaKnown RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 TTC25Q96NG3 672 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CCDC77Q9BR77 488 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 RIOK2Q9BVS4 552 aaKnown RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 SPATA16Q9BXB7 569 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 C1QTNF1Q9BXJ1 281 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 ABCG4Q9H172 646 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 ABCG8Q9H221 673 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CDC42EP4Q9H3Q1 356 aaKnown RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 FAM96AQ9H5X1 160 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 C6orf106Q9H6K1 298 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 ASB8Q9H765 288 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 SUDS3Q9H7L9 328 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 VPS37BQ9H9H4 285 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 IL21RQ9HBE5 538 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 FZD3Q9NPG1 666 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 IL26Q9NPH9 171 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CD93Q9NPY3 652 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 PRMT8Q9NR22 394 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 TREX1Q9NSU2 369 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 C20orf96Q9NUD7 363 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 ARGLU1Q9NWB6 273 aaPredicted RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 NINJ2Q9NZG7 142 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 SLC2A6Q9UGQ3 507 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 CD84Q9UIB8 345 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 TMEM98Q9Y2Y6 226 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 SPTBN5Q9NRC6 3674 aaKnown RBP4.33□□□□□ -1.72
USP48-211ENST00000526044 EML5Q05BV3 1969 aa4.33□□□□□ -1.72
USP48-211ENST00000526044 TECTAO75443 2155 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 A0A087WUV0 522 aaPredicted RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 UQCRHLA0A096LP55 91 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 TMEM272A0A1B0GTI8 110 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 ZCWPW2A0A1B0GU75 182 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 TCRBV9S1A1TA0A576 114 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 FAM90A20PA6NIJ5 464 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 GOLGA8KD6RF30 607 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 PRAMEF26H0Y7S4 382 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 GOLGA8TH3BQL2 631 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 H7C0S8 307 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 RTCAO00442 366 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 FPGTO14772 594 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 PFDN6O15212 129 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 RIPK2O43353 540 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UGT1A9O60656 530 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 NDUFS3O75489 264 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 SRP72O76094 671 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 RHOBTB1O94844 696 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 SLC25A14O95258 325 aaPredicted RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 ACSL3O95573 720 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 SYF2O95926 243 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 GOT2P00505 430 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 IGHV4-34P06331 123 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UQCRHP07919 91 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 SP9P0CG40 484 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 ERVK-10P10266 1014 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 TDGF1P13385 188 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 GM2AP17900 193 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UGT1A6P19224 532 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UGT1A1P22309 533 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UGT1A4P22310 534 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 HNRNPA2B1P22626 353 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 PRPH2P23942 346 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 CD27P26842 260 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 AKT2P31751 481 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 STX2P32856 288 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UGT1A3P35503 534 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UGT1A5P35504 534 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 ARCN1P48444 511 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 ZNF140P52738 457 aaPredicted RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 XIAPP98170 497 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 CACNG1Q06432 222 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 PMPCAQ10713 525 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 PEX6Q13608 980 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 ALKBH1Q13686 389 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 ITGA9Q13797 1035 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms