RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 BTLAQ7Z6A9 289 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 TC2NQ8N9U0 490 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 TMEM52Q8NDY8 209 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 KRT35Q92764 455 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 SMIM10Q96HG1 83 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 JSRP1Q96MG2 331 aaPredicted RBP12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 UGT2B28Q9BY64 529 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 ANGPTL4Q9BY76 406 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 PRTFDC1Q9NRG1 225 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 PACSIN3Q9UKS6 424 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 EFR3BQ9Y2G0 817 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 SLC6A5Q9Y345 797 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 CLCA3PQ9Y6N3 262 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 C4orf51C9J302 202 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 ZBTB14O43829 449 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 ZNF189O75820 626 aaPredicted RBP12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 RCBTB2O95199 551 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 ESR1P03372 595 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 GYPCP04921 128 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 CCKARP32238 428 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 IDUAP35475 653 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 DIO3P55073 304 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 COPS2P61201 443 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 RCAN2Q14206 197 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 MPEG1Q2M385 716 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 LYPD8Q6UX82 237 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 STRA8Q7Z7C7 330 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 PRELID2Q8N945 189 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 MORN4Q8NDC4 146 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 ABHD11Q8NFV4 315 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 OR4K1Q8NGD4 311 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 OR5L2Q8NGL0 311 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 ZPLD1Q8TCW7 415 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 PTPMT1Q8WUK0 201 aaPredicted RBP12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 INTS12Q96CB8 462 aaKnown RBP12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 OR8D2Q9GZM6 311 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 TMEM160Q9NX00 188 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 ZNF148Q9UQR1 794 aa12.66□□□□□ -0.38
NKX3-1-202ENST00000523261 TRBC2A0A5B9 178 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CTAGE15A4D2H0 777 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 ERI2A8K979 691 aaKnown RBP12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 MSTNO14793 375 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 NRDCO43847 1150 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 TRIM3O75382 744 aaPredicted RBP12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 LRATO95237 230 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 ACSL3O95573 720 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 HPNP05981 417 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 NPPBP16860 134 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 HNF4AP41235 474 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CDK9P50750 372 aaKnown RBP12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CLCN7P51798 805 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 GDF10P55107 478 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CCZ1BP86790 482 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CCZ1P86791 482 aaPredicted RBP12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 ASPHQ12797 758 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 SLC13A2Q13183 592 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 LCTLQ6UWM7 567 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 PLXDC2Q6UX71 529 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CYHR1Q6ZMK1 362 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 DNM1P46Q6ZS02 220 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CTAGE6Q86UF2 777 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 GCNT2Q8N0V5 402 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 GIMAP7Q8NHV1 300 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 DAZLQ92904 295 aaKnown RBP12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 ANKRD9Q96BM1 317 aaPredicted RBP12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 SPACA9Q96E40 222 aaPredicted RBP12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 TM9SF2Q99805 663 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 SGPP1Q9BX95 441 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 OSBPL8Q9BZF1 889 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 KLHL31Q9H511 634 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CHRAC1Q9NRG0 131 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 HOMER3Q9NSC5 361 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 TREX1Q9NSU2 369 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CNIH4Q9P003 139 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 LPAR3Q9UBY5 353 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 ZFP69BQ9UJL9 534 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CRYL1Q9Y2S2 319 aa12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 CHCHD2Q9Y6H1 151 aaPredicted RBP12.65□□□□□ -0.38
NKX3-1-202ENST00000523261 DYSFO75923 2080 aa12.65□□□□□ -0.39
NKX3-1-202ENST00000523261 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 GPRIN2O60269 458 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 TRAPPC6AO75865 159 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 TNFSF13O75888 250 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 IFNA16P05015 189 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 MPC1LP0DKB6 136 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 CYP4B1P13584 511 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 PTPN7P35236 360 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 ACVR1BP36896 505 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 CD79BP40259 229 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 SCTRP47872 440 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 CCR8P51685 355 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 OCRLQ01968 901 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 CUL1Q13616 776 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 RUNX2Q13950 521 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 UBAP2Q5T6F2 1119 aaKnown RBP12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 PPP1R21Q6ZMI0 780 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 C22orf34Q6ZV56 151 aa12.64□□□□□ -0.39
NKX3-1-202ENST00000523261 UBE2R2Q712K3 238 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms