RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 TMEM88Q6PEY1 159 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ALKAL2Q6UX46 152 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 Q6ZPB1 254 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 TMEM179Q6ZVK1 233 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 TAS1R3Q7RTX0 852 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ASPGQ86U10 573 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ZFP82Q8N141 532 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 WDSUB1Q8N9V3 476 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 UBA3Q8TBC4 463 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PROKR1Q8TCW9 393 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ADAMTS14Q8WXS8 1223 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ELMOD3Q96FG2 381 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PAWRQ96IZ0 340 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 HIST1H2AHQ96KK5 128 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 HIST1H2AJQ99878 128 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 WDR77Q9BQA1 342 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 SEMA4CQ9C0C4 833 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 SPRTNQ9H040 489 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 RNF39Q9H2S5 420 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 VAPAQ9P0L0 249 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 SH3BP4Q9P0V3 963 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 KLHL42Q9P2K6 505 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PLEKHB1Q9UF11 243 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 BTNL2Q9UIR0 455 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 HCN2Q9UL51 889 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 COLQQ9Y215 455 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 LOC105369274A0A096LPK9 316 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 TEX13CA0A0J9YWL9 993 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 POM121BA6NF01 834 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 GPR171O14626 319 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 CASC3O15234 703 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 GPR37O15354 613 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 SIGLEC5O15389 551 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 DHX15O43143 795 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 ADAMTS4O75173 837 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 RP2O75695 350 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 DIRAS1O95057 198 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 SIX3O95343 332 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 GNRH1P01148 92 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 URODP06132 367 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 HLA-DOAP06340 250 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PRR35P0CG20 571 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PRG2P13727 222 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 SPI1P17947 270 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ACSL1P33121 698 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 CTNNB1P35222 781 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 GPX4P36969 197 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 MMP12P39900 470 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 XKP51811 444 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 NR0B1P51843 470 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 EPHA4P54764 986 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 FKBP1AP62942 108 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 SOX4Q06945 474 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 SIGLEC14Q08ET2 396 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 LCP2Q13094 533 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 SPP2Q13103 211 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 DUSP4Q13115 394 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 GPR176Q14439 515 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PON3Q15166 354 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 SEC23BQ15437 767 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 SEZ6Q53EL9 994 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 NOMO2Q5JPE7 1267 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 FAM74A1Q5RGS3 127 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 FAM171A1Q5VUB5 890 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PRAMEF13Q5VWM6 474 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ESRP1Q6NXG1 681 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 MSANTD2Q6P1R3 559 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 FAHD1Q6P587 224 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 RBMS3Q6XE24 437 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 TMEM17Q86X19 198 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 SPAG16Q8N0X2 631 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 OR4N4Q8N0Y3 316 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 C2CD4AQ8NCU7 369 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 DENND6BQ8NEG7 585 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 TMIEQ8NEW7 156 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PPHLN1Q8NEY8 458 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 RNASE11Q8TAA1 199 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 NETO1Q8TDF5 533 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 KCNJ9Q92806 393 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 FAM120BQ96EK7 910 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 TMEM41AQ96HV5 264 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ZBTB45Q96K62 511 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 MRPL45Q9BRJ2 306 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 PPP1R3EQ9H7J1 279 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 GLOD4Q9HC38 313 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PDLIM7Q9NR12 457 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PRMT7Q9NVM4 692 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 CNOT2Q9NZN8 540 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 SEC14L3Q9UDX4 400 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ATXN7L1Q9ULK2 861 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 CHD7Q9P2D1 2997 aa6.87□□□□□ -1.31
LDB2-216ENST00000515064 SMIM30A4D0T7 59 aa6.87□□□□□ -1.31
LDB2-216ENST00000515064 FAM220BPB1ANY3 271 aa6.87□□□□□ -1.31
LDB2-216ENST00000515064 ADAMDEC1O15204 470 aa6.87□□□□□ -1.31
LDB2-216ENST00000515064 SNAPC5O75971 98 aa6.87□□□□□ -1.31
LDB2-216ENST00000515064 SIX6O95475 246 aa6.87□□□□□ -1.31
LDB2-216ENST00000515064 CHRM5P08912 532 aaPredicted RBP6.87□□□□□ -1.31
LDB2-216ENST00000515064 ENGP17813 658 aa6.87□□□□□ -1.31
LDB2-216ENST00000515064 GABRB1P18505 474 aa6.87□□□□□ -1.31
LDB2-216ENST00000515064 CYP2B6P20813 491 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms