RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 MAPK12P53778 367 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 ST3GAL4Q11206 333 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 CBX3Q13185 183 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 IRF3Q14653 427 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 KHDRBS2Q5VWX1 349 aaKnown RBP13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 SAXO2Q658L1 398 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 ZNF367Q7RTV3 350 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 VN1R5Q7Z5H4 357 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 OR9Q2Q8NGE9 314 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 ING5Q8WYH8 240 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 ITFG2Q969R8 447 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 CXorf36Q9H7Y0 433 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 GPR83Q9NYM4 423 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 TMCC3Q9ULS5 477 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 MRPS23Q9Y3D9 190 aaKnown RBP13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 SNX8Q9Y5X2 465 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 BRCA2P51587 3418 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 ZAR1LA6NP61 321 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 J3KTA2 159 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 CAPN5O15484 640 aaPredicted RBP13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 PDPK1O15530 556 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 ZSCAN9O15535 394 aaPredicted RBP13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 TGM1P22735 817 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 NUDT6P53370 316 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 CRISP1P54107 249 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 MANFP55145 182 aaKnown RBP13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 SMIM11AP58511 58 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 CNTN1Q12860 1018 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 ELAVL3Q14576 367 aaKnown RBP13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 HEPACAMQ14CZ8 416 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 PTGES3Q15185 160 aaKnown RBP13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 LRRC26Q2I0M4 334 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 PRSS53Q2L4Q9 553 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 ARMCX4Q5H9R4 360 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 COLEC12Q5KU26 742 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 CEACAM20Q6UY09 585 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 PLEKHG7Q6ZR37 379 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 PTCHD4Q6ZW05 846 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 AMZ2Q86W34 360 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 CXorf40AQ8TE69 158 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 POF1BQ8WVV4 589 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 TFGQ92734 400 aaPredicted RBP13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 GTPBP3Q969Y2 492 aaKnown RBP13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 CDCA4Q9BXL8 241 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 NT5DC2Q9H857 520 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 AMBNQ9NP70 447 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 MS4A12Q9NXJ0 267 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 CCDC59Q9P031 241 aaKnown RBP13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 KCND3Q9UK17 655 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 KLK4Q9Y5K2 254 aa13.57□□□□□ -0.24
AP003555.1-202ENST00000511013 SH3BP5O60239 455 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 OXSR1O95747 527 aaPredicted RBP13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 ADAP00813 363 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 ADORA3P0DMS8 318 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 METAP1P53582 386 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 IFITM3Q01628 133 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 ZNF181Q2M3W8 571 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 TIMM50Q3ZCQ8 353 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 AGAP7PQ5VUJ5 663 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 FRMPD2BQ6IN97 320 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 ADAMTSL4Q6UY14 1074 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 ERN2Q76MJ5 926 aaKnown RBP13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 C11orf96Q7Z7L8 435 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 DSG4Q86SJ6 1040 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 C12orf40Q86WS4 652 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 LMNTD1Q8N9Z9 388 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 AQP11Q8NBQ7 271 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 OR5AR1Q8NGP9 310 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 SPPL3Q8TCT6 385 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 RASSF5Q8WWW0 418 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 RAB7BQ96AH8 199 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 TM4SF18Q96CE8 201 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 ZNF764Q96H86 408 aaPredicted RBP13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 IL17FQ96PD4 163 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 MS4A8Q9BY19 250 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 ARMC7Q9H6L4 198 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 NEUROD4Q9HD90 331 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 WASH6PQ9NQA3 447 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 DEC1Q9P2X7 70 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 FTSJ1Q9UET6 329 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 MGAT4BQ9UQ53 548 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 UGT2A1Q9Y4X1 527 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 PCDHGA3Q9Y5H0 932 aa13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 DNMT3AQ9Y6K1 912 aaPredicted RBP13.56□□□□□ -0.24
AP003555.1-202ENST00000511013 PLPP1O14494 284 aa13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 NFATC1O95644 943 aa13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 POU2F2P09086 479 aa13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 ERGP11308 486 aa13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 EPCAMP16422 314 aa13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 EIF2DP41214 584 aaKnown RBP13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 CCR8P51685 355 aa13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 RPS3AP61247 264 aaKnown RBP13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 UBE3AQ05086 875 aa13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 GANABQ14697 944 aaKnown RBP13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 SPDYE7PQ495Y7 208 aa13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 CYP27C1Q4G0S4 372 aa13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 TCEAL5Q5H9L2 206 aa13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 FAM83HQ6ZRV2 1179 aaPredicted RBP13.55□□□□□ -0.24
AP003555.1-202ENST00000511013 DENND4AQ7Z401 1863 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms