RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 ZNF696Q9H7X3 374 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 FAM114A2Q9NRY5 505 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 HOMER3Q9NSC5 361 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 CTTNBP2NLQ9P2B4 639 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 LIMA1Q9UHB6 759 aaKnown RBP9.81□□□□□ -0.84
SNF8-207ENST00000509995 LCMT1Q9UIC8 334 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 GDF2Q9UK05 429 aaPredicted RBP9.81□□□□□ -0.84
SNF8-207ENST00000509995 CLDN16Q9Y5I7 305 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 MAGED1Q9Y5V3 778 aaPredicted RBP9.81□□□□□ -0.84
SNF8-207ENST00000509995 FRG2CA6NGY1 282 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 SSX4O60224 188 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 CEP104O60308 925 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 PSIP1O75475 530 aaKnown RBP9.8□□□□□ -0.84
SNF8-207ENST00000509995 THBDP07204 575 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 ZNF888P0CJ79 500 aaPredicted RBP9.8□□□□□ -0.84
SNF8-207ENST00000509995 RBL1P28749 1068 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 ATP5DP30049 168 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 PPARGP37231 505 aaPredicted RBP9.8□□□□□ -0.84
SNF8-207ENST00000509995 CDKN2BP42772 138 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 CDK9P50750 372 aaKnown RBP9.8□□□□□ -0.84
SNF8-207ENST00000509995 ACTG1P63261 375 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 RNF4P78317 190 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 BMPR2Q13873 1038 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 GBX1Q14549 363 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 ELAVL1Q15717 326 aaKnown RBP9.8□□□□□ -0.84
SNF8-207ENST00000509995 ODF2Q5BJF6 829 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 ABHD17CQ6PCB6 329 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 CLEC17AQ6ZS10 378 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 ZNF534Q76KX8 674 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 OR8K3Q8NH51 312 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 ZFAND2BQ8WV99 257 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 WNT2BQ93097 391 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 ABTB1Q969K4 478 aaPredicted RBP9.8□□□□□ -0.84
SNF8-207ENST00000509995 LRRC45Q96CN5 670 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 STARD4Q96DR4 205 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 SPACA9Q96E40 222 aaPredicted RBP9.8□□□□□ -0.84
SNF8-207ENST00000509995 PLPPR2Q96GM1 343 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 UCN2Q96RP3 112 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 DOHHQ9BU89 302 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 PHACTR1Q9C0D0 580 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 RHBGQ9H310 441 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 UBQLN3Q9H347 655 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 C10orf88Q9H8K7 445 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 CLK4Q9HAZ1 481 aaKnown RBP9.8□□□□□ -0.84
SNF8-207ENST00000509995 ELOVL5Q9NYP7 299 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 CNIH4Q9P003 139 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 UVRAGQ9P2Y5 699 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 CLCF1Q9UBD9 225 aa9.8□□□□□ -0.84
SNF8-207ENST00000509995 CHCHD2Q9Y6H1 151 aaPredicted RBP9.8□□□□□ -0.84
SNF8-207ENST00000509995 ELOA3DA6NLF2 546 aaPredicted RBP9.79□□□□□ -0.84
SNF8-207ENST00000509995 KIAA0513O60268 411 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 TRIM3O75382 744 aaPredicted RBP9.79□□□□□ -0.84
SNF8-207ENST00000509995 LRATO95237 230 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 ACSL3O95573 720 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 CATP04040 527 aaKnown RBP9.79□□□□□ -0.84
SNF8-207ENST00000509995 DPP4P27487 766 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 PWP1Q13610 501 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 RPS6KA1Q15418 735 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 MPEG1Q2M385 716 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 ELOA3BQ3SY89 546 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 BBS9Q3SYG4 887 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 FASTKD1Q53R41 847 aaKnown RBP9.79□□□□□ -0.84
SNF8-207ENST00000509995 ANKRD34AQ69YU3 496 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 VWA1Q6PCB0 445 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 CLEC2AQ6UVW9 174 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 APTXQ7Z2E3 356 aaKnown RBP9.79□□□□□ -0.84
SNF8-207ENST00000509995 CCDC50Q8IVM0 306 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 KLHDC8BQ8IXV7 354 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 TMEM132CQ8N3T6 1108 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 LRRC17Q8N6Y2 441 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 ZNF321PQ8N8H1 164 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 MFSD9Q8NBP5 474 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 ELOA3Q8NG57 546 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 OR5L2Q8NGL0 311 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 OR4L1Q8NH43 312 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 GABPB2Q8TAK5 448 aaPredicted RBP9.79□□□□□ -0.84
SNF8-207ENST00000509995 FBXW5Q969U6 566 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 PPP1R2P1Q96PQ5 205 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 SLC39A3Q9BRY0 314 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 OPN3Q9H1Y3 402 aaPredicted RBP9.79□□□□□ -0.84
SNF8-207ENST00000509995 EML4Q9HC35 981 aaKnown RBP9.79□□□□□ -0.84
SNF8-207ENST00000509995 PIH1D1Q9NWS0 290 aaKnown RBP9.79□□□□□ -0.84
SNF8-207ENST00000509995 MAPRE3Q9UPY8 281 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 SH2B3Q9UQQ2 575 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 IKBKGQ9Y6K9 419 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 CLCA3PQ9Y6N3 262 aa9.79□□□□□ -0.84
SNF8-207ENST00000509995 A0A087X0T9 212 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 H0Y3Z8 333 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 GFYI3L273 518 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 TMPRSS2O15393 492 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 FAM228BP0C875 321 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 GRK3P35626 688 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 SLC6A12P48065 614 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 KCNJ5P48544 419 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 NAGLUP54802 743 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 ASPHQ12797 758 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 FAPQ12884 760 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 EIPR1Q53HC9 387 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 PIGGQ5H8A4 983 aa9.78□□□□□ -0.84
SNF8-207ENST00000509995 AARS2Q5JTZ9 985 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms