RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 VTI1BQ9UEU0 232 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 CORO1CQ9ULV4 474 aaPredicted RBP14.73□□□□□ -0.05
RAB40C-202ENST00000509637 ERVK-11Q9UQG0 969 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 MTO1Q9Y2Z2 717 aaKnown RBP14.73□□□□□ -0.05
RAB40C-202ENST00000509637 KIAA1549Q9HCM3 1950 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 NCF1BA6NI72 391 aaPredicted RBP14.72□□□□□ -0.05
RAB40C-202ENST00000509637 WASHC1A8K0Z3 465 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 NCF1CA8MVU1 366 aaPredicted RBP14.72□□□□□ -0.05
RAB40C-202ENST00000509637 CXorf49A8MYA2 514 aaPredicted RBP14.72□□□□□ -0.05
RAB40C-202ENST00000509637 CTNSO60931 367 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 CLEC3AO75596 197 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 NADKO95544 446 aaPredicted RBP14.72□□□□□ -0.05
RAB40C-202ENST00000509637 RFPL3SP0C7P2 107 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 NCF1P14598 390 aaPredicted RBP14.72□□□□□ -0.05
RAB40C-202ENST00000509637 HOXB4P17483 251 aaPredicted RBP14.72□□□□□ -0.05
RAB40C-202ENST00000509637 CNR1P21554 472 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 ACVR2AP27037 513 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 PIGAP37287 484 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 STXBP1P61764 594 aaKnown RBP14.72□□□□□ -0.05
RAB40C-202ENST00000509637 DOC2AQ14183 400 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 OR4D1Q15615 310 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 ELAVL1Q15717 326 aaKnown RBP14.72□□□□□ -0.05
RAB40C-202ENST00000509637 ZNF585AQ6P3V2 769 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 ZNF595Q8IYB9 648 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 RNF175Q8N4F7 328 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 GRK7Q8WTQ7 553 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 ASB15Q8WXK1 588 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 SMC6Q96SB8 1091 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 EGFL8Q99944 293 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 NAT9Q9BTE0 207 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 NT5DC2Q9H857 520 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 SH2D2AQ9NP31 389 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 L3MBTL1Q9Y468 752 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 MPDZO75970 2070 aa14.72□□□□□ -0.05
RAB40C-202ENST00000509637 NAV3Q8IVL0 2385 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 USP27XA6NNY8 438 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 FANCGO15287 622 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 B3GALT2O43825 422 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 SH3BGRLO75368 114 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 C1QAP02745 245 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 GNAZP19086 355 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 HSPA7P48741 367 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 RNF4P78317 190 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 PLGLB1Q02325 96 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 MGAT5Q09328 741 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 BMPR2Q13873 1038 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 FRG1Q14331 258 aaKnown RBP14.71□□□□□ -0.05
RAB40C-202ENST00000509637 TGFBIQ15582 683 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 OR4N5Q8IXE1 308 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 NKAPQ8N5F7 415 aaKnown RBP14.71□□□□□ -0.05
RAB40C-202ENST00000509637 OR5M3Q8NGP4 307 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 SLC2A12Q8TD20 617 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 UCN3Q969E3 161 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 WDR34Q96EX3 536 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 FAR2Q96K12 515 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 SERINC2Q96SA4 455 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 SORBS1Q9BX66 1292 aaKnown RBP14.71□□□□□ -0.05
RAB40C-202ENST00000509637 OR8D2Q9GZM6 311 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 REXO4Q9GZR2 422 aaKnown RBP14.71□□□□□ -0.05
RAB40C-202ENST00000509637 CTNNAL1Q9UBT7 734 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 SNX12Q9UMY4 172 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 ATG4BQ9Y4P1 393 aa14.71□□□□□ -0.05
RAB40C-202ENST00000509637 ATP6AP2A0A1C7CYW4 349 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 PHGDHO43175 533 aaKnown RBP14.7□□□□□ -0.06
RAB40C-202ENST00000509637 H2AFYO75367 372 aaKnown RBP14.7□□□□□ -0.06
RAB40C-202ENST00000509637 ATP6AP2O75787 350 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 IFNA16P05015 189 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 GGT5P36269 586 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 MTTPP55157 894 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 WNT3P56703 355 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 HYAL4Q2M3T9 481 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 ZNF791Q3KP31 576 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-202ENST00000509637 KRTAP21-3Q3LHN1 58 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 HSDL2Q6YN16 418 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 GPALPP1Q8IXQ4 340 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 EID3Q8N140 333 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 TMEM132CQ8N3T6 1108 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 MORN4Q8NDC4 146 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 ZNF559Q9BR84 538 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 CXXC4Q9H2H0 198 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 IL1RL2Q9HB29 575 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 KCNN3Q9UGI6 736 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 ARHGAP21Q5T5U3 1957 aa14.7□□□□□ -0.06
RAB40C-202ENST00000509637 ABCA4P78363 2273 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 FAM221AA4D161 298 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 LRRC3CA6NJW4 275 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 GOLGA6L6A8MZA4 724 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 C17orf105B2RV13 164 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 CLDN4O14493 209 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 FGF17O60258 216 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 PRKRAO75569 313 aaKnown RBP14.69□□□□□ -0.06
RAB40C-202ENST00000509637 CTAG2O75638 210 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 IGKV3-11P04433 115 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 ATP5A1P25705 553 aaKnown RBP14.69□□□□□ -0.06
RAB40C-202ENST00000509637 HNMTP50135 292 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 IGLV3-21P80748 117 aaPredicted RBP14.69□□□□□ -0.06
RAB40C-202ENST00000509637 MRPS25P82663 173 aaKnown RBP14.69□□□□□ -0.06
RAB40C-202ENST00000509637 ASPHQ12797 758 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 MORF4L2Q15014 288 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 PIGGQ5H8A4 983 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms