RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CCDC120Q96HB5 630 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 APOLD1Q96LR9 279 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 ZSWIM3Q96MP5 696 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 DUSP26Q9BV47 211 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 CLEC4MQ9H2X3 399 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 ACER3Q9NUN7 267 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 NLKQ9UBE8 527 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 IQCF5A8MTL0 148 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 UGDHO60701 494 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 ENTPD6O75354 484 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 LRATO95237 230 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 DHFRP00374 187 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 IFNA16P05015 189 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 ASGR1P07306 291 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 ADRA2AP08913 450 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 OSMP13725 252 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 POU3F3P20264 500 aaPredicted RBP15.2■□□□□ 0.02
SCLT1-208ENST00000506368 IGFBP6P24592 240 aaPredicted RBP15.2■□□□□ 0.02
SCLT1-208ENST00000506368 HOXD9P28356 352 aaPredicted RBP15.2■□□□□ 0.02
SCLT1-208ENST00000506368 HNMTP50135 292 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 ATP12AP54707 1039 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 HACD4Q5VWC8 232 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 OR8H3Q8N146 312 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 OR8K5Q8NH50 307 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 CXorf40BQ96DE9 158 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 TRMT61AQ96FX7 289 aaKnown RBP15.2■□□□□ 0.02
SCLT1-208ENST00000506368 APIPQ96GX9 242 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 TMEM38AQ9H6F2 299 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 CUEDC1Q9NWM3 386 aaPredicted RBP15.2■□□□□ 0.02
SCLT1-208ENST00000506368 FBXO9Q9UK97 447 aaPredicted RBP15.2■□□□□ 0.02
SCLT1-208ENST00000506368 Q9Y3F1 56 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 RAI2Q9Y5P3 530 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 MRPL42Q9Y6G3 142 aaKnown RBP15.2■□□□□ 0.02
SCLT1-208ENST00000506368 CHD5Q8TDI0 1954 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 KDELR3O43731 214 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 SLC19A2O60779 497 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 IGLV3-27P01718 113 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 HBQ1P09105 142 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 OR56A5P0C7T3 313 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 RAB14P61106 215 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 FAM214AQ32MH5 1076 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 KLHL22Q53GT1 634 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 CRB2Q5IJ48 1285 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 DGKKQ5KSL6 1271 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 GPRC6AQ5T6X5 926 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 GPR139Q6DWJ6 353 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 TMEM65Q6PI78 240 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 DNAJB7Q7Z6W7 309 aaPredicted RBP15.2■□□□□ 0.02
SCLT1-208ENST00000506368 LUZP2Q86TE4 346 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 GPAT4Q86UL3 456 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 LAPTM4BQ86VI4 370 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 AQP11Q8NBQ7 271 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 TMEM145Q8NBT3 493 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 MTFMTQ96DP5 389 aaKnown RBP15.2■□□□□ 0.02
SCLT1-208ENST00000506368 MTERF3Q96E29 417 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 SORCS2Q96PQ0 1159 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 TMEM106CQ9BVX2 250 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 CRISPLD2Q9H0B8 497 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 FAM105AQ9NUU6 356 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 TMEM39AQ9NV64 488 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 IL17CQ9P0M4 197 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 NCKAP1Q9Y2A7 1128 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 ENPP4Q9Y6X5 453 aa15.2■□□□□ 0.02
SCLT1-208ENST00000506368 SCN8AQ9UQD0 1980 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 C7orf66A4D0T2 115 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 TLR5O60602 858 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 FHP07954 510 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 SRPRAP08240 638 aaKnown RBP15.19■□□□□ 0.02
SCLT1-208ENST00000506368 RRASP10301 218 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 NR2F6P10588 404 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 HSD3B1P14060 373 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 HSD3B2P26439 372 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 HMGCLP35914 325 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 EVX1P49640 407 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 PGFP49763 221 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 HSF2Q03933 536 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 ARHGEF7Q14155 803 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 AANATQ16613 207 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 DUSP6Q16828 381 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 FRG2Q64ET8 278 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 C12orf73Q69YU5 71 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 BRAT1Q6PJG6 821 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 CASP12Q6UXS9 341 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 MACC1Q6ZN28 852 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 PLEKHM3Q6ZWE6 761 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 LRRTM3Q86VH5 581 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 NPAS3Q8IXF0 933 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 SLC43A3Q8NBI5 491 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 HGDQ93099 445 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 UROC1Q96N76 676 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 FRG2BQ96QU4 278 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 KATNB1Q9BVA0 655 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 MED28Q9H204 178 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 TAS2R7Q9NYW3 318 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 IL20Q9NYY1 176 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 GLS2Q9UI32 602 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 MGAT4BQ9UQ53 548 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 ALPK3Q96L96 1907 aa15.19■□□□□ 0.02
SCLT1-208ENST00000506368 A0A1B0GVI7 797 aa15.18■□□□□ 0.02
SCLT1-208ENST00000506368 CCDC85CA6NKD9 419 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms