RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SRSF11Q05519 484 aaKnown RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 SLAMF1Q13291 335 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 BIRC2Q13490 618 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 GPR19Q15760 415 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 PGS1Q32NB8 556 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 MMEL1Q495T6 779 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 DEFB134Q4QY38 66 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 RUNDC3AQ59EK9 446 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 ZC3H12BQ5HYM0 836 aaKnown RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 CPTPQ5TA50 214 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 NDUFAF5Q5TEU4 345 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 C18orf63Q68DL7 685 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 NANOGP8Q6NSW7 305 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 GPR180Q86V85 440 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 KMT5CQ86Y97 462 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 TICAM1Q8IUC6 712 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 SCUBE1Q8IWY4 988 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 CA13Q8N1Q1 262 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 PCYOX1LQ8NBM8 494 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 SRFBP1Q8NEF9 429 aaKnown RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 OR4D9Q8NGE8 314 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 OR5T3Q8NGG3 340 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 OR1L3Q8NH93 324 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 SUN3Q8TAQ9 357 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 STARD8Q92502 1023 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 ZNF501Q96CX3 271 aaPredicted RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 ZNF681Q96N22 645 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 ANKRD27Q96NW4 1050 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 SERINC2Q96SA4 455 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 CDRT15Q96T59 188 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 SPRTNQ9H040 489 aaPredicted RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 DENND2DQ9H6A0 471 aaPredicted RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 EPS8L2Q9H6S3 715 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 NANOGQ9H9S0 305 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 IL1RL2Q9HB29 575 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 PDE7BQ9NP56 450 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 SIRT3Q9NTG7 399 aaPredicted RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 LYARQ9NX58 379 aaKnown RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 DAPP1Q9UN19 280 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 USP22Q9UPT9 525 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 TMEM184BQ9Y519 407 aaPredicted RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 PCDHB14Q9Y5E9 798 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 CLDN16Q9Y5I7 305 aa9.83□□□□□ -0.84
TPM3-217ENST00000504663 NUP214P35658 2090 aaPredicted RBP9.83□□□□□ -0.84
TPM3-217ENST00000504663 PRSS51A0A1B0GVH4 220 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 CYR61O00622 381 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 ACOT8O14734 319 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 PGRMC2O15173 223 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 ERN1O75460 977 aaKnown RBP9.82□□□□□ -0.84
TPM3-217ENST00000504663 NPPAP01160 153 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 EIF2S1P05198 315 aaKnown RBP9.82□□□□□ -0.84
TPM3-217ENST00000504663 SEPHS1P49903 392 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 EMP3P54852 163 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 MTPNP58546 118 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 HSD11B2P80365 405 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 MXRA7P84157 204 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 PLIN5Q00G26 463 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 MS4A2Q01362 244 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 SPEM2Q0P670 501 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 ART3Q13508 389 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 SLC9A5Q14940 896 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 SUZ12Q15022 739 aaKnown RBP9.82□□□□□ -0.84
TPM3-217ENST00000504663 MAPKAPK3Q16644 382 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 CLPPQ16740 277 aaPredicted RBP9.82□□□□□ -0.84
TPM3-217ENST00000504663 PRAMEF17Q5VTA0 474 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 FAM180BQ6P0A1 224 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 SLC48A1Q6P1K1 146 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 B3GNT8Q7Z7M8 397 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 CALHM3Q86XJ0 350 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 FBXW8Q8N3Y1 598 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 ZNF454Q8N9F8 522 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 FAM156AQ8NDB6 213 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 OR8J3Q8NGG0 315 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 PSMA8Q8TAA3 256 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 RERGQ96A58 199 aaPredicted RBP9.82□□□□□ -0.84
TPM3-217ENST00000504663 PPCDCQ96CD2 204 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 AURKBQ96GD4 344 aaPredicted RBP9.82□□□□□ -0.84
TPM3-217ENST00000504663 AHCYL2Q96HN2 611 aaKnown RBP9.82□□□□□ -0.84
TPM3-217ENST00000504663 CNDP2Q96KP4 475 aaKnown RBP9.82□□□□□ -0.84
TPM3-217ENST00000504663 CCDC74BQ96LY2 380 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 HOPXQ9BPY8 73 aaPredicted RBP9.82□□□□□ -0.84
TPM3-217ENST00000504663 CENPKQ9BS16 269 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 EDEM2Q9BV94 578 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 CHST8Q9H2A9 424 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 LYRM4Q9HD34 91 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 SPAG4Q9NPE6 437 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 SEMA4GQ9NTN9 838 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 FAM86C1Q9NVL1 165 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 GPATCH2Q9NW75 528 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 SOHLH2Q9NX45 425 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 NDE1Q9NXR1 346 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 EHD3Q9NZN3 535 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 FBXW2Q9UKT8 454 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 RAB23Q9ULC3 237 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 MAPRE3Q9UPY8 281 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 NAALAD2Q9Y3Q0 740 aa9.82□□□□□ -0.84
TPM3-217ENST00000504663 MYO1GB0I1T2 1018 aa9.81□□□□□ -0.84
TPM3-217ENST00000504663 TGFBR3LH3BV60 316 aa9.81□□□□□ -0.84
TPM3-217ENST00000504663 SGK494L7N484 410 aa9.81□□□□□ -0.84
TPM3-217ENST00000504663 RDH16O75452 317 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 830.8 ms