RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 LY86O95711 162 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ANGPTL1O95841 491 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 RLN1P04808 185 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 LCKP06239 509 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 OR8G3PP0DMU2 310 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CKBP12277 381 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PRG2P13727 222 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 FOSL2P15408 326 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SPI1P17947 270 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 IMPDH1P20839 514 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 FPR3P25089 353 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 MAPK1P28482 360 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PIK3CBP42338 1070 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CAPZA1P52907 286 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 MTPNP58546 118 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 TAS2R39P59534 338 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 GTF2BQ00403 316 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 BCL2L1Q07817 233 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 MTAPQ13126 283 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 TOP3AQ13472 1001 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 TRAM2Q15035 370 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CA9Q16790 459 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ZFP69Q49AA0 526 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 OR2B11Q5JQS5 317 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC35D3Q5M8T2 416 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ARMC12Q5T9G4 340 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 OLFML2AQ68BL7 652 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC25A25Q6KCM7 469 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 XRRA1Q6P2D8 792 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 LINGO4Q6UY18 593 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 BTN2A1Q7KYR7 527 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 EIF3MQ7L2H7 374 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 R3HCC1LQ7Z5L2 792 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 TAF8Q7Z7C8 310 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 VSIG10LQ86VR7 867 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 STK40Q8N2I9 435 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 POMGNT2Q8NAT1 580 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 OR10A6Q8NH74 314 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CANT1Q8WVQ1 401 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CLEC4DQ8WXI8 215 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM203Q969S6 136 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 GTPBP3Q969Y2 492 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 LINGO1Q96FE5 620 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ZDHHC12Q96GR4 267 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 MSANTD3Q96H12 275 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 FCRL2Q96LA5 508 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SERPINB11Q96P15 392 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ADAM2Q99965 735 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SORBS1Q9BX66 1292 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ANKRD60Q9BZ19 345 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 TOLLIPQ9H0E2 274 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SAV1Q9H4B6 383 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 NXF3Q9H4D5 531 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SEPSECSQ9HD40 501 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC22A11Q9NSA0 550 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF224Q9NZL3 707 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 VSX1Q9NZR4 365 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ARHGAP28Q9P2N2 729 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 RPS6KB2Q9UBS0 482 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PCDHB8Q9UN66 801 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PPIEQ9UNP9 301 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SORCS3Q9UPU3 1222 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 WBP11Q9Y2W2 641 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CBY1Q9Y3M2 126 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 OAS3Q9Y6K5 1087 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SPTBN1Q01082 2364 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CACNA1BQ00975 2339 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM92AA1XBS5 289 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 OR51F1A6NGY5 319 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 OR6C75A6NL08 312 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 G3V2T6 193 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 UBE2CO00762 179 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 SCAMP2O15127 329 aaKnown RBP3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 MFSD11O43934 449 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 CIDEAO60543 219 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 PLIN3O60664 434 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 QDPRP09417 244 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 NPSP0C0P6 89 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 JUNBP17275 347 aaPredicted RBP3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 PTNP21246 168 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 ZP3P21754 424 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 PRKACGP22612 351 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 SDHAP31040 664 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 RPL35P42766 123 aaKnown RBP3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 LHX1P48742 406 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 NUDT6P53370 316 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 CEBPGP53567 150 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 AP1S1P61966 158 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 NUTF2P61970 127 aaKnown RBP3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 HSD11B2P80365 405 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 PUDPQ08623 228 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 PRKD1Q15139 912 aaPredicted RBP3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 LRRC73Q5JTD7 316 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 ATPAF1Q5TC12 328 aaPredicted RBP3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 LCN1P1Q5VSP4 162 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 FSTL4Q6MZW2 842 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 ARMC6Q6NXE6 501 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC27A1Q6PCB7 646 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 KCTD8Q6ZWB6 473 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 ARCQ7LC44 396 aa3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms