RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 HIST2H2AA3Q6FI13 130 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 MED27Q6P2C8 311 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 C3P1Q6ZMU1 363 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 Q6ZPB1 254 aaPredicted RBP15.12■□□□□ 0.01
SCLT1-204ENST00000503215 OR4N5Q8IXE1 308 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 LAS2Q8IYD9 372 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 TEX9Q8N6V9 391 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 DOK4Q8TEW6 326 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 MARVELD3Q96A59 401 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 ANKRD9Q96BM1 317 aaPredicted RBP15.12■□□□□ 0.01
SCLT1-204ENST00000503215 GPR78Q96P69 363 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 KCNC2Q96PR1 638 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 ADAP2Q9NPF8 381 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 SNX15Q9NRS6 342 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 OPTCQ9UBM4 332 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 ENTPD4Q9Y227 616 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 MYO9AB2RTY4 2548 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 LRBAP50851 2863 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 ABCA12Q86UK0 2595 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 PINLYPA6NC86 204 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 WASHC1A8K0Z3 465 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 FCHO1O14526 889 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 PEX1O43933 1283 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 ZNF354AO60765 605 aaPredicted RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 OR2J2O76002 312 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 ZFAND5O76080 213 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 ZNF24P17028 368 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 PCDH1Q08174 1060 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 NAB1Q13506 487 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 ART3Q13508 389 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 DDX39BQ13838 428 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 ELAVL1Q15717 326 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 UAP1Q16222 522 aaPredicted RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 PFKFB4Q16877 469 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 SRRM1Q8IYB3 904 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 CYP4Z2PQ8N1L4 340 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 PLD6Q8N2A8 252 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 TMEM156Q8N614 296 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 HUS1BQ8NHY5 278 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 TMEM125Q96AQ2 219 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 MAGED4Q96JG8 741 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 PHF12Q96QT6 1004 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 TBCDQ9BTW9 1192 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 LYRM4Q9HD34 91 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 DEPPQ9NTK1 212 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 ZNF358Q9NW07 568 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 NINJ2Q9NZG7 142 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 SUCOQ9UBS9 1254 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 VTI1BQ9UEU0 232 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 MRPS33Q9Y291 106 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 PKDREJQ9NTG1 2253 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 A0A096LPK6 155 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 A0A0G2JMM0 328 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 A0A1W2PPB8 328 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 A0A1W2PRS3 328 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 KIR3DP1A8MWS1 328 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 WWP2O00308 870 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 PRKRAO75569 313 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 OR6B1O95007 311 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 ETHE1O95571 254 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 ALDOAP04075 364 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 HIST1H1TP22492 207 aaPredicted RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 TGM3Q08188 693 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 DEPDC1Q5TB30 811 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 KHDRBS2Q5VWX1 349 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 C8orf74Q6P047 294 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 DGAT2L6Q6ZPD8 337 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 DOLPP1Q86YN1 238 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 TMEM132CQ8N3T6 1108 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 ZNF808Q8N4W9 903 aaPredicted RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 FAM98AQ8NCA5 519 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 C16orf45Q96MC5 204 aaPredicted RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 MTERF1Q99551 399 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 OR8D2Q9GZM6 311 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 PRM3Q9NNZ6 103 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 DMGDHQ9UI17 866 aaKnown RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 KLF13Q9Y2Y9 288 aaPredicted RBP15.11■□□□□ 0.01
SCLT1-204ENST00000503215 MEMO1Q9Y316 297 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 HRH3Q9Y5N1 445 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 CLCA3PQ9Y6N3 262 aa15.11■□□□□ 0.01
SCLT1-204ENST00000503215 A0A087X1B8 175 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 C17orf105B2RV13 164 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 CDK2AP1O14519 115 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 ADAM10O14672 748 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 HNRNPRO43390 633 aaKnown RBP15.1■□□□□ 0.01
SCLT1-204ENST00000503215 HS6ST1O60243 411 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 FGF17O60258 216 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 URI1O94763 535 aaPredicted RBP15.1■□□□□ 0.01
SCLT1-204ENST00000503215 SCELO95171 688 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 SIX3O95343 332 aaPredicted RBP15.1■□□□□ 0.01
SCLT1-204ENST00000503215 SNRPB2P08579 225 aaKnown RBP15.1■□□□□ 0.01
SCLT1-204ENST00000503215 EPB42P16452 691 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 HTR1EP28566 365 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 HPDP32754 393 aaPredicted RBP15.1■□□□□ 0.01
SCLT1-204ENST00000503215 SOX3P41225 446 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 CASP6P55212 293 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 STX4Q12846 297 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 SLAMF1Q13291 335 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 NAA30Q147X3 362 aaPredicted RBP15.1■□□□□ 0.01
SCLT1-204ENST00000503215 SETDB1Q15047 1291 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms