RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 MCMBPQ9BTE3 642 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 REEP4Q9H6H4 257 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 WDR54Q9H977 334 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 PNPOQ9NVS9 261 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 THUMPD1Q9NXG2 353 aaKnown RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 MAP10Q9P2G4 905 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 HEMK1Q9Y5R4 338 aaPredicted RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 LRRC14BA6NHZ5 514 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 PRR19A6NJB7 356 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 PROM1O43490 865 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 EDF1O60869 148 aaKnown RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 CTNSO60931 367 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 CIB2O75838 187 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 IFNA14P01570 189 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 IL6P05231 212 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 CHRNGP07510 517 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 GIMD1P0DJR0 217 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 XKP51811 444 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 PGDP52209 483 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 KLC1Q07866 573 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 NCF4Q15080 339 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 MAPKAPK3Q16644 382 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 AGKQ53H12 422 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 PWWP2BQ6NUJ5 590 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 LETMD1Q6P1Q0 360 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 RNF111Q6ZNA4 994 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 TMEM151BQ8IW70 566 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 GALNT12Q8IXK2 581 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 KBTBD2Q8IY47 623 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 LRRC25Q8N386 305 aaPredicted RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 STT3BQ8TCJ2 826 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 UTP15Q8TED0 518 aaKnown RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 CNTNAP3BQ96NU0 1288 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 CNTNAP3Q9BZ76 1288 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 EPN3Q9H201 632 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 C12orf65Q9H3J6 166 aaKnown RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 TMEM9Q9P0T7 183 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 LEF1Q9UJU2 399 aaPredicted RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 NDUFAF1Q9Y375 327 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 KLK4Q9Y5K2 254 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 ANKRD36A6QL64 1941 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 ATP6AP2A0A1C7CYW4 349 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 LRIT2A6NDA9 550 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 HNRNPCL1O60812 293 aaKnown RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 ATP6AP2O75787 350 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 ATP5HO75947 161 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 LSP1P33241 339 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 CLCN2P51788 898 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 WDR4P57081 412 aaKnown RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 ZNF155Q12901 538 aaPredicted RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 RTP5Q14D33 572 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 ENDOVQ8N8Q3 282 aaKnown RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 ADAMTS15Q8TE58 950 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 MCUR1Q96AQ8 359 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 THOC1Q96FV9 657 aaKnown RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 C5orf34Q96MH7 638 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 C1orf50Q9BV19 199 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 SARGQ9BW04 601 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 TMEM120AQ9BXJ8 343 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 EHD3Q9NZN3 535 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 PNMA8BQ9ULN7 279 aaPredicted RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 E9PBE3 544 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 PRAMEF10O60809 474 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 GPR75O95800 540 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 CREB1P16220 341 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 ENDOUP21128 410 aaKnown RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 CERS1P27544 350 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 PTPN4P29074 926 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 RORAP35398 523 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 NCBP2P52298 156 aaKnown RBP eCLIP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 TBL3Q12788 808 aaKnown RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 ABRAXAS2Q15018 415 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 BTBD16Q32M84 506 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 SFTPA2Q8IWL1 248 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 TMEM102Q8N9M5 508 aaPredicted RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 KCT2Q8NC54 265 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 OR56A1Q8NGH5 318 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 MS4A6EQ96DS6 147 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 MAGED4Q96JG8 741 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 DUSP26Q9BV47 211 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 EBPLQ9BY08 206 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 ALOXE3Q9BYJ1 711 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 ADAP2Q9NPF8 381 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 SDHAF3Q9NRP4 125 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 CALML5Q9NZT1 146 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 ZIM2Q9NZV7 527 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 ANKRD11Q6UB99 2663 aaPredicted RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 ADAMTS9Q9P2N4 1935 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 LOC105369274A0A096LPK9 316 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 LOC102723532A0A0G2JNH3 316 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 A0A1W2PRB8 838 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 A8MUA0 341 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 FOXO6A8MYZ6 492 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 TM4SF5O14894 197 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 SASH3O75995 380 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 ZFAND5O76080 213 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 DHRS4L1P0CG22 281 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 EPORP19235 508 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 TNFRSF17Q02223 184 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 PCDH1Q08174 1060 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms