RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	GPN3	Q9UHW5	284 aa	Predicted RBP	12.8	□□□□□ -0.36
APTX-231	ENST00000494973	ATP6V1H	Q9UI12	483 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	FBXW2	Q9UKT8	454 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	ENTPD4	Q9Y227	616 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	PADI2	Q9Y2J8	665 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	MMACHC	Q9Y4U1	282 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	TMEM184B	Q9Y519	407 aa	Predicted RBP	12.8	□□□□□ -0.36
APTX-231	ENST00000494973	B3GALT1	Q9Y5Z6	326 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	ZNF860	A6NHJ4	632 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	MEN1	O00255	615 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	EBAG9	O00559	213 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	PCDH17	O14917	1159 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	ANKRD28	O15084	1053 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	DXO	O77932	396 aa	Known RBP	12.79	□□□□□ -0.36
APTX-231	ENST00000494973	STK17B	O94768	372 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	TNFSF15	O95150	251 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	AIFM1	O95831	613 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	FURIN	P09958	794 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	ITGAX	P20702	1163 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	TACR1	P25103	407 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	PIK3R1	P27986	724 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	NTS	P30990	170 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	S100A3	P33764	101 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	KIR3DL1	P43629	444 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	POLR2J	P52435	117 aa	Known RBP	12.79	□□□□□ -0.36
APTX-231	ENST00000494973	HNRNPH2	P55795	449 aa	Known RBP	12.79	□□□□□ -0.36
APTX-231	ENST00000494973	HSD17B7	P56937	341 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	SHC2	P98077	582 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	KLF10	Q13118	480 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	STX5	Q13190	355 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	PDE7A	Q13946	482 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	RUNX2	Q13950	521 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	RCAN2	Q14206	197 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	KRT72	Q14CN4	511 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	AGK	Q53H12	422 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	COQ5	Q5HYK3	327 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	CPTP	Q5TA50	214 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	ANXA8L1	Q5VT79	327 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	FOXR1	Q6PIV2	292 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	PRSS41	Q7RTY9	318 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	RIMKLA	Q8IXN7	391 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	OR8J2	Q8NGG1	315 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	OR51Q1	Q8NH59	317 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	DNAJB8	Q8NHS0	232 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	RP9	Q8TA86	221 aa	Known RBP	12.79	□□□□□ -0.36
APTX-231	ENST00000494973	MAPKAP1	Q9BPZ7	522 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	BHLHE41	Q9C0J9	482 aa	Predicted RBP	12.79	□□□□□ -0.36
APTX-231	ENST00000494973	TGIF2	Q9GZN2	237 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	SLC26A1	Q9H2B4	701 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	RPF2	Q9H7B2	306 aa	Known RBP	12.79	□□□□□ -0.36
APTX-231	ENST00000494973	WDR54	Q9H977	334 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	THSD1	Q9NS62	852 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	FAM120C	Q9NX05	1096 aa	Known RBP	12.79	□□□□□ -0.36
APTX-231	ENST00000494973	TAS2R7	Q9NYW3	318 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	CCDC167	Q9P0B6	97 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	KCMF1	Q9P0J7	381 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	12.79	□□□□□ -0.36
APTX-231	ENST00000494973	HCN3	Q9P1Z3	774 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	IFT80	Q9P2H3	777 aa	Predicted RBP	12.79	□□□□□ -0.36
APTX-231	ENST00000494973	TRPC4	Q9UBN4	977 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	ATG4B	Q9Y4P1	393 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	ZNF780B	Q9Y6R6	833 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	SPTB	P11277	2137 aa		12.79	□□□□□ -0.36
APTX-231	ENST00000494973	IGLV3-12	A0A075B6K2	115 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973		A0A1W2PR48	441 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	DCDC2B	A2VCK2	349 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	CCDC154	A6NI56	674 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	STMND1	H3BQB6	276 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	ANGPT2	O15123	496 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	HNRNPCL1	O60812	293 aa	Known RBP	12.78	□□□□□ -0.36
APTX-231	ENST00000494973	SLITRK5	O94991	958 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	BMP10	O95393	424 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	TIAF1	O95411	115 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	DLGAP3	O95886	979 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	NTRK1	P04629	796 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	FH	P07954	510 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	SNRPB2	P08579	225 aa	Known RBP	12.78	□□□□□ -0.36
APTX-231	ENST00000494973	ETV5	P41161	510 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	XCR1	P46094	333 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	ALDH9A1	P49189	494 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	CLDN6	P56747	220 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	UFM1	P61960	85 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	SERTAD2	Q14140	314 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	UBAP2L	Q14157	1087 aa	Known RBP	12.78	□□□□□ -0.36
APTX-231	ENST00000494973	C1orf189	Q5VU69	101 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	ZNF385C	Q66K41	422 aa	Predicted RBP	12.78	□□□□□ -0.36
APTX-231	ENST00000494973	SLC48A1	Q6P1K1	146 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	PAOX	Q6QHF9	649 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	BLOC1S3	Q6QNY0	202 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	C6orf15	Q6UXA7	325 aa	Predicted RBP	12.78	□□□□□ -0.36
APTX-231	ENST00000494973	DGLUCY	Q7Z3D6	616 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	AMER3	Q8N944	861 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	CLHC1	Q8NHS4	586 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	ZBED6CL	Q96FA7	236 aa	Predicted RBP	12.78	□□□□□ -0.36
APTX-231	ENST00000494973	CCDC106	Q9BWC9	280 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	YIPF2	Q9BWQ6	316 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	ACTL8	Q9H568	366 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	TEX10	Q9NXF1	929 aa	Predicted RBP	12.78	□□□□□ -0.36
APTX-231	ENST00000494973	BAIAP2L1	Q9UHR4	511 aa		12.78	□□□□□ -0.36
APTX-231	ENST00000494973	ACSL6	Q9UKU0	697 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms