RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 DDX39BQ13838 428 aaKnown RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 ANXA8L1Q5VT79 327 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 PLCZ1Q86YW0 608 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 ELMOD2Q8IZ81 293 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 FGF11Q92914 225 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 KIAA1143Q96AT1 154 aaPredicted RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 TOR4AQ9NXH8 423 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 RNF181Q9P0P0 153 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 MTCL1Q9Y4B5 1905 aaKnown RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 H0YIV9 168 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 SH3BGRLO75368 114 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 MYCP01106 439 aaPredicted RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 CSKP41240 450 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 GAS1P54826 345 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 CRTC1Q6UUV9 634 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 SERPINA13PQ6UXR4 307 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 TMIGD1Q6UXZ0 262 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 PROKR2Q8NFJ6 384 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 HUS1BQ8NHY5 278 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 ZBED6CLQ96FA7 236 aaPredicted RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 SLC35A5Q9BS91 424 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 FAM83DQ9H4H8 585 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 PPP1R3EQ9H7J1 279 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 NIPAL2Q9H841 368 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 B3GAT2Q9NPZ5 323 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 MARCH5Q9NX47 278 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 ATP6V1HQ9UI12 483 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 YARS2Q9Y2Z4 477 aaKnown RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 SF3B6Q9Y3B4 125 aaKnown RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 PLXNA2O75051 1894 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 C12orf71A8MTZ7 269 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 CPEP16870 476 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 RHCEP18577 417 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 DAB2P98082 770 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 IRF8Q02556 426 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 RBBP4Q09028 425 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 RTP2Q5QGT7 225 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 DEDD2Q8WXF8 326 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 CIDECQ96AQ7 238 aaPredicted RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 METTL2AQ96IZ6 378 aaKnown RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 CITED4Q96RK1 184 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 TRAF4Q9BUZ4 470 aaPredicted RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 POLR2J2Q9GZM3 115 aaKnown RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 BRF2Q9HAW0 419 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 RC3H2Q9HBD1 1191 aaKnown RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 C6orf47O95873 294 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 IRF1P10914 325 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 ASMTP46597 345 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 BNC1Q01954 994 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 SP140Q13342 867 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 XKR6Q5GH73 641 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 WDR45BQ5MNZ6 344 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 GRHL2Q6ISB3 625 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 USP50Q70EL3 339 aaPredicted RBP14.65□□□□□ -0.06
SDF4-207ENST00000494748 HJURPQ8NCD3 748 aaPredicted RBP14.65□□□□□ -0.06
SDF4-207ENST00000494748 DUSP18Q8NEJ0 188 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 UPRTQ96BW1 309 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 MKRN2Q9H000 416 aaKnown RBP14.65□□□□□ -0.06
SDF4-207ENST00000494748 NMRK2Q9NPI5 230 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 ZSCAN5BA6NJL1 495 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 POU1F1P28069 291 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 CA8P35219 290 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 ILKQ13418 452 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 MADCAM1Q13477 382 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 C22orf42Q6IC83 251 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 APCDD1Q8J025 514 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 IL17RCQ8NAC3 791 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 OR4M2Q8NGB6 313 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 DIRAS2Q96HU8 199 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 LYSMD1Q96S90 227 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 DHRS9Q9BPW9 319 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 WRAP53Q9BUR4 548 aaKnown RBP14.65□□□□□ -0.06
SDF4-207ENST00000494748 KATNB1Q9BVA0 655 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 BHLHE41Q9C0J9 482 aaPredicted RBP14.65□□□□□ -0.06
SDF4-207ENST00000494748 GIMAP4Q9NUV9 329 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 STOML2Q9UJZ1 356 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 SSR3Q9UNL2 185 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 MAPRE3Q9UPY8 281 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 HTTP42858 3142 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 SMLR1H3BR10 107 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 SLC16A5O15375 505 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 SOX14O95416 240 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 CYP2A6P11509 494 aaPredicted RBP14.65□□□□□ -0.06
SDF4-207ENST00000494748 OSMP13725 252 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 AKR1A1P14550 325 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 CDK6Q00534 326 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 RUNX1T1Q06455 604 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 SLC5A12Q1EHB4 618 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 FAM26DQ5JW98 314 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 CAMKK1Q8N5S9 505 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 SYT14Q8NB59 555 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 ATP6V1C2Q8NEY4 427 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 MAP6Q96JE9 813 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 MAGEB10Q96LZ2 347 aaPredicted RBP14.65□□□□□ -0.06
SDF4-207ENST00000494748 NELL2Q99435 816 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 KLF16Q9BXK1 252 aaPredicted RBP14.65□□□□□ -0.06
SDF4-207ENST00000494748 ATP13A2Q9NQ11 1180 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 HCSTQ9UBK5 93 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 ENOPH1Q9UHY7 261 aa14.65□□□□□ -0.06
SDF4-207ENST00000494748 TRBC2A0A5B9 178 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms