RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 STX4Q12846 297 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 FAM153CQ494X1 144 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 OR4C11Q6IEV9 310 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 DNAJB8Q8NHS0 232 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 THAP3Q8WTV1 239 aaPredicted RBP31.01■■■□□ 2.55
CBX4-203ENST00000494546 RGMAQ96B86 450 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 C5orf34Q96MH7 638 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 LRFN1Q9P244 771 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 TSC22D4Q9Y3Q8 395 aa31.01■■■□□ 2.55
CBX4-203ENST00000494546 STX16-NPEPL1H3BU86 382 aa31■■■□□ 2.55
CBX4-203ENST00000494546 STX16O14662 325 aa31■■■□□ 2.55
CBX4-203ENST00000494546 GP1BBP13224 206 aa31■■■□□ 2.55
CBX4-203ENST00000494546 CPN2P22792 545 aa31■■■□□ 2.55
CBX4-203ENST00000494546 TDGF1P3P51864 188 aa31■■■□□ 2.55
CBX4-203ENST00000494546 ZNF468Q5VIY5 522 aaPredicted RBP31■■■□□ 2.55
CBX4-203ENST00000494546 HORMAD2Q8N7B1 307 aa31■■■□□ 2.55
CBX4-203ENST00000494546 L3MBTL4Q8NA19 623 aa31■■■□□ 2.55
CBX4-203ENST00000494546 LRRN4CLQ8ND94 238 aa31■■■□□ 2.55
CBX4-203ENST00000494546 NCLNQ969V3 563 aa31■■■□□ 2.55
CBX4-203ENST00000494546 VMP1Q96GC9 406 aa31■■■□□ 2.55
CBX4-203ENST00000494546 CDK15Q96Q40 435 aa31■■■□□ 2.55
CBX4-203ENST00000494546 MRPL57Q9BQC6 102 aaKnown RBP31■■■□□ 2.55
CBX4-203ENST00000494546 ALOXE3Q9BYJ1 711 aa31■■■□□ 2.55
CBX4-203ENST00000494546 PCDHGB6Q9Y5F9 930 aa31■■■□□ 2.55
CBX4-203ENST00000494546 OR7A17O14581 309 aa30.99■■■□□ 2.55
CBX4-203ENST00000494546 LDB3O75112 727 aa30.99■■■□□ 2.55
CBX4-203ENST00000494546 CLDN9O95484 217 aa30.99■■■□□ 2.55
CBX4-203ENST00000494546 DDAH2O95865 285 aa30.99■■■□□ 2.55
CBX4-203ENST00000494546 GCAP28676 217 aa30.99■■■□□ 2.55
CBX4-203ENST00000494546 SLAMF1Q13291 335 aa30.99■■■□□ 2.55
CBX4-203ENST00000494546 ZRSR2Q15696 482 aaKnown RBP30.99■■■□□ 2.55
CBX4-203ENST00000494546 ELAVL1Q15717 326 aaKnown RBP30.99■■■□□ 2.55
CBX4-203ENST00000494546 OR52B6Q8NGF0 335 aa30.99■■■□□ 2.55
CBX4-203ENST00000494546 MRPL46Q9H2W6 279 aaKnown RBP30.99■■■□□ 2.55
CBX4-203ENST00000494546 CLCA3PQ9Y6N3 262 aa30.99■■■□□ 2.55
CBX4-203ENST00000494546 SYNDIG1LA6NDD5 238 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 CYSRT1A8MQ03 144 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 PLPP1O14494 284 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 FCHO1O14526 889 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 PTX3P26022 381 aaPredicted RBP30.98■■■□□ 2.55
CBX4-203ENST00000494546 NEK2P51955 445 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 CCNG1P51959 295 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 KCNK10P57789 538 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 ID2Q02363 134 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 TMEM132CQ8N3T6 1108 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 SCMH1Q96GD3 660 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 NSUN5Q96P11 429 aaKnown RBP30.98■■■□□ 2.55
CBX4-203ENST00000494546 CCDC77Q9BR77 488 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 ZNF223Q9UK11 482 aaPredicted RBP30.98■■■□□ 2.55
CBX4-203ENST00000494546 PCTPQ9UKL6 214 aa30.98■■■□□ 2.55
CBX4-203ENST00000494546 PPIEQ9UNP9 301 aaKnown RBP30.98■■■□□ 2.55
CBX4-203ENST00000494546 NEURL1O76050 574 aa30.97■■■□□ 2.55
CBX4-203ENST00000494546 MST1P26927 711 aa30.97■■■□□ 2.55
CBX4-203ENST00000494546 CYB561P49447 251 aa30.97■■■□□ 2.55
CBX4-203ENST00000494546 ADGRD1Q6QNK2 874 aa30.97■■■□□ 2.55
CBX4-203ENST00000494546 GSPT2Q8IYD1 628 aaKnown RBP30.97■■■□□ 2.55
CBX4-203ENST00000494546 TMEM178AQ8NBL3 297 aa30.97■■■□□ 2.55
CBX4-203ENST00000494546 VTI1BQ9UEU0 232 aa30.97■■■□□ 2.55
CBX4-203ENST00000494546 HIVEP3Q5T1R4 2406 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 LDLRP01130 860 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 TNNI3P19429 210 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 GPR143P51810 404 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 SERTAD2Q14140 314 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 TEX35Q5T0J7 233 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 SLC25A25Q6KCM7 469 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 GFRALQ6UXV0 394 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 GALNTL5Q7Z4T8 443 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 WDR20Q8TBZ3 569 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 MTFMTQ96DP5 389 aaKnown RBP30.96■■■□□ 2.55
CBX4-203ENST00000494546 MTBPQ96DY7 904 aa30.96■■■□□ 2.55
CBX4-203ENST00000494546 CDK2AP1O14519 115 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 SLC25A12O75746 678 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 SP1P08047 785 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 SLC29A2Q14542 456 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 MAPKAPK3Q16644 382 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 C4orf17Q53FE4 359 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 TIFABQ6ZNK6 161 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 RPS27LQ71UM5 84 aaKnown RBP30.95■■■□□ 2.55
CBX4-203ENST00000494546 ARMC10Q8N2F6 343 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 ZCCHC7Q8N3Z6 543 aaKnown RBP30.95■■■□□ 2.55
CBX4-203ENST00000494546 DAZLQ92904 295 aaKnown RBP30.95■■■□□ 2.55
CBX4-203ENST00000494546 ANKRD9Q96BM1 317 aaPredicted RBP30.95■■■□□ 2.55
CBX4-203ENST00000494546 TXLNGYQ9BZA5 131 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 ZBTB26Q9HCK0 441 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 SEMA4BQ9NPR2 832 aaPredicted RBP30.95■■■□□ 2.55
CBX4-203ENST00000494546 MS4A12Q9NXJ0 267 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 PHF11Q9UIL8 331 aa30.95■■■□□ 2.55
CBX4-203ENST00000494546 SVILO95425 2214 aa30.94■■■□□ 2.54
CBX4-203ENST00000494546 A1L4Q6 167 aa30.94■■■□□ 2.54
CBX4-203ENST00000494546 LRRTM2O43300 516 aa30.94■■■□□ 2.54
CBX4-203ENST00000494546 UNC5CO95185 931 aa30.94■■■□□ 2.54
CBX4-203ENST00000494546 ETHE1O95571 254 aa30.94■■■□□ 2.54
CBX4-203ENST00000494546 TRHRP34981 398 aaPredicted RBP30.94■■■□□ 2.54
CBX4-203ENST00000494546 HLCSP50747 726 aa30.94■■■□□ 2.54
CBX4-203ENST00000494546 GPR180Q86V85 440 aa30.94■■■□□ 2.54
CBX4-203ENST00000494546 OR4N5Q8IXE1 308 aa30.94■■■□□ 2.54
CBX4-203ENST00000494546 OR14A16Q8NHC5 309 aa30.94■■■□□ 2.54
CBX4-203ENST00000494546 PTPMT1Q8WUK0 201 aaPredicted RBP30.94■■■□□ 2.54
CBX4-203ENST00000494546 SREK1Q8WXA9 508 aaKnown RBP30.94■■■□□ 2.54
CBX4-203ENST00000494546 NTMT1Q9BV86 223 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms