RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 IMMP1LQ96LU5 166 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 PTCHD1Q96NR3 888 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 NPLQ9BXD5 320 aaPredicted RBP10.94□□□□□ -0.66
UBA3-211ENST00000493957 IQCGQ9H095 443 aaKnown RBP10.94□□□□□ -0.66
UBA3-211ENST00000493957 ELOVL6Q9H5J4 265 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 ZNF552Q9H707 407 aaPredicted RBP10.94□□□□□ -0.66
UBA3-211ENST00000493957 ATP13A2Q9NQ11 1180 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 ADGRE2Q9UHX3 823 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 PCDHGA9Q9Y5G4 932 aaKnown RBP10.94□□□□□ -0.66
UBA3-211ENST00000493957 A0A088AWK7 358 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 A0A0A6YYD5 115 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 TCRBV16S1A1N1A0A5B0 115 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 WASHC1A8K0Z3 465 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PRMT3O60678 531 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 ERLIN1O75477 346 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 MLYCDO95822 493 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PRR35P0CG20 571 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 ITGAMP11215 1152 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 ZNF10P21506 573 aaPredicted RBP10.93□□□□□ -0.66
UBA3-211ENST00000493957 IL10P22301 178 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 JAK1P23458 1154 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PTX3P26022 381 aaPredicted RBP10.93□□□□□ -0.66
UBA3-211ENST00000493957 SERPINB3P29508 390 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 HMOX2P30519 316 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 ARRB2P32121 409 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 HPDP32754 393 aaPredicted RBP10.93□□□□□ -0.66
UBA3-211ENST00000493957 ETV4P43268 484 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PGDP52209 483 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 ID2Q02363 134 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 GALNT1Q10472 559 aaPredicted RBP10.93□□□□□ -0.66
UBA3-211ENST00000493957 CUL3Q13618 768 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 MYBPC3Q14896 1274 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PAPD4Q6PIY7 484 aaKnown RBP10.93□□□□□ -0.66
UBA3-211ENST00000493957 RIPOR1Q6ZS17 1223 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 ASB18Q6ZVZ8 466 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 SRFBP1Q8NEF9 429 aaKnown RBP10.93□□□□□ -0.66
UBA3-211ENST00000493957 METTL6Q8TCB7 284 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 BRIX1Q8TDN6 353 aaKnown RBP10.93□□□□□ -0.66
UBA3-211ENST00000493957 METTL21AQ8WXB1 218 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PSMF1Q92530 271 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 SERPINI1Q99574 410 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PRR14Q9BWN1 585 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 SLC29A3Q9BZD2 475 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 ACPTQ9BZG2 426 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 CLK4Q9HAZ1 481 aaKnown RBP10.93□□□□□ -0.66
UBA3-211ENST00000493957 LYRM4Q9HD34 91 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PRDM9Q9NQV7 894 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PRTFDC1Q9NRG1 225 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 RIC8BQ9NVN3 520 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PPT2Q9UMR5 302 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 SNX6Q9UNH7 406 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 SLC12A4Q9UP95 1085 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 ATG4BQ9Y4P1 393 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 CSAG2Q9Y5P2 127 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 PTGDR2Q9Y5Y4 395 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 EXPH5Q8NEV8 1989 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 SVILO95425 2214 aa10.93□□□□□ -0.66
UBA3-211ENST00000493957 A0A1W2PR48 441 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 EIF4E1BA6NMX2 242 aaKnown RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 TRIM13O60858 407 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 LDB3O75112 727 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 ESRRBO95718 433 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 KLK1P06870 262 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 CHRNGP07510 517 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 CYC1P08574 325 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 CPN2P22792 545 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 TPP2P29144 1249 aaPredicted RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 ST13P50502 369 aaKnown RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 PKNOX1P55347 436 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 SOX8P57073 446 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 OR4D2P58180 307 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 HMGCS1Q01581 520 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 TBL3Q12788 808 aaKnown RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 SLC13A2Q13183 592 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 CASP8Q14790 479 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 CFAP157Q5JU67 520 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 B3GNTL1Q67FW5 361 aaPredicted RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 CLEC6AQ6EIG7 209 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 MRM1Q6IN84 353 aaKnown RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 COMMD6Q7Z4G1 85 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 OR4N5Q8IXE1 308 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 MMP21Q8N119 569 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 METTL4Q8N3J2 472 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 ZCCHC7Q8N3Z6 543 aaKnown RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 KIF2BQ8N4N8 673 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 SIRT6Q8N6T7 355 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 MYRIPQ8NFW9 859 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 ANKRD9Q96BM1 317 aaPredicted RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 PGM2Q96G03 612 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 MAGEB10Q96LZ2 347 aaPredicted RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 SMAD5Q99717 465 aaKnown RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 ROGDIQ9GZN7 287 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 DDX31Q9H8H2 851 aaKnown RBP10.92□□□□□ -0.66
UBA3-211ENST00000493957 PSD3Q9NYI0 1048 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 LUZP4Q9P127 313 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 MID2Q9UJV3 735 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 MMACHCQ9Y4U1 282 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 ASB4Q9Y574 426 aa10.92□□□□□ -0.66
UBA3-211ENST00000493957 A0A1W2PS29 197 aa10.91□□□□□ -0.66
UBA3-211ENST00000493957 WDR91A4D1P6 747 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms